Predicted mutation
evidence seq id position mutation annotation gene description
RA 74 18,891 G→T intergenic (–/–)  /  –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*7418,8910GT100.0% 224.9 / NA 64intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (34/30);  total (34/30)

GATCTTTCTGGTATGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTGCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCGAAGGCCCGT  >  74/18793‑18987
                                                                                                  |                                                                                                
gatCTTTCTGGTATGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTcc                                                                                                <  2:738908/101‑1 (MQ=255)
gatCTTTCTGGTATGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTcc                                                                                                >  2:1436850/1‑101 (MQ=255)
 atCTTTCTGGTATGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTccc                                                                                               <  2:347343/101‑1 (MQ=255)
       cTGGTATGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCagag                                                                                         >  1:390447/1‑101 (MQ=255)
       cTGGTATGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCagag                                                                                         <  1:1527582/101‑1 (MQ=255)
       cTGGTATGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCagag                                                                                         <  1:1089438/101‑1 (MQ=255)
       cTGGTATGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCagag                                                                                         <  2:475808/101‑1 (MQ=255)
         ggTATGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGtt                                                                                       <  2:1062782/101‑1 (MQ=255)
           tATGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTa                                                                                     >  1:1274065/1‑101 (MQ=255)
             tGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAAc                                                                                   <  2:366985/101‑1 (MQ=255)
              ggATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACg                                                                                  <  2:357365/101‑1 (MQ=255)
                 tGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTg                                                                               >  2:1470055/1‑101 (MQ=255)
                   tAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAg                                                                             <  2:220275/101‑1 (MQ=255)
                         gTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGAt                                                                       <  1:209130/101‑1 (MQ=255)
                         gTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGAt                                                                       >  2:508530/1‑101 (MQ=255)
                         gTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGAt                                                                       >  1:68603/1‑101 (MQ=255)
                         gTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGAt                                                                       <  2:1462928/101‑1 (MQ=255)
                         gTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGAt                                                                       >  2:1570756/1‑101 (MQ=255)
                           aaGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGt                                                                     <  2:1473129/101‑1 (MQ=255)
                           aaGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGt                                                                     >  1:869668/1‑101 (MQ=255)
                               tATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGcc                                                                 >  2:952854/1‑101 (MQ=255)
                               tATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGcc                                                                 >  1:1550821/1‑101 (MQ=255)
                                aTTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCg                                                                >  1:1481700/1‑101 (MQ=255)
                                aTTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCg                                                                <  2:570059/101‑1 (MQ=255)
                                aTTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCg                                                                >  2:604314/1‑101 (MQ=255)
                                aTTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCg                                                                >  2:1058821/1‑101 (MQ=255)
                                  tGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCt                                                              >  1:1160148/1‑101 (MQ=255)
                                   gATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCtt                                                             >  1:253668/1‑101 (MQ=255)
                                    aTTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCttt                                                            >  2:1147737/1‑101 (MQ=255)
                                    aTTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCttt                                                            >  1:162279/1‑101 (MQ=255)
                                       ctcgctcgTGAAGCGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTAt                                                         <  1:348552/101‑1 (MQ=255)
                                       ctcgctcgTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTAt                                                         >  1:1684433/1‑101 (MQ=255)
                                       ctcgctcgTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTAt                                                         <  1:487785/101‑1 (MQ=255)
                                       ctcgctcgTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTAt                                                         <  2:23208/101‑1 (MQ=255)
                                       ctcgctcgTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTAt                                                         >  2:1283213/1‑101 (MQ=255)
                                        tcgctcgTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATg                                                        <  2:1189705/101‑1 (MQ=255)
                                         cgctcgTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATgg                                                       <  1:1248737/101‑1 (MQ=255)
                                           ctcgTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCg                                                     <  1:93764/101‑1 (MQ=255)
                                              gTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAAt                                                  >  2:101163/1‑101 (MQ=255)
                                                gAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCt                                                >  2:344750/1‑101 (MQ=255)
                                                  aaCGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGt                                              <  2:577480/101‑1 (MQ=255)
                                                    cGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTca                                            >  2:1259252/1‑101 (MQ=255)
                                                    cGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTca                                            <  1:394033/101‑1 (MQ=255)
                                                      ggACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTcaca                                          <  2:1148553/101‑1 (MQ=255)
                                                       gACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAg                                         >  2:785524/1‑101 (MQ=255)
                                                       gACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAg                                         >  2:168390/1‑101 (MQ=255)
                                                        aCGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGc                                        <  1:1449125/101‑1 (MQ=255)
                                                                tGGAGCTGGCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGAt                                >  2:11969/1‑101 (MQ=255)
                                                                        gCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGc                        >  1:1066308/1‑101 (MQ=255)
                                                                        gCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGc                        <  1:591178/101‑1 (MQ=255)
                                                                        gCGGATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGc                        >  1:384849/1‑101 (MQ=255)
                                                                           gATATTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCcgc                     >  2:924839/1‑101 (MQ=255)
                                                                             tatTGAAATTGAACCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCcgcgc                   >  1:884173/1‑101 (MQ=255)
                                                                              attgaaattgaaCCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCcgcgcg                  >  2:1638881/1‑101 (MQ=255)
                                                                              attgaaattgaaCCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCcgcgcg                  >  2:1127244/1‑101 (MQ=255)
                                                                                 gaaattgaaCCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGt               >  2:775794/1‑101 (MQ=255)
                                                                                     ttgaaCCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCg           >  1:890479/1‑101 (MQ=255)
                                                                                        aaCCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCGAAg        <  1:952859/101‑1 (MQ=255)
                                                                                        aaCCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCGAAg        <  2:624863/101‑1 (MQ=255)
                                                                                        aaCCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCGAAg        <  1:529403/101‑1 (MQ=255)
                                                                                        aaCCTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCGAAg        <  1:175979/101‑1 (MQ=255)
                                                                                          ccTGTGCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCGAAGGc      >  2:798740/1‑101 (MQ=255)
                                                                                            tgtgCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCGAAGGccc    <  2:162279/101‑1 (MQ=255)
                                                                                            tgtgCTTCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCGAAGGccc    <  2:884168/101‑1 (MQ=255)
                                                                                              tgcttcCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCGAAGGCCCGt  <  2:433020/101‑1 (MQ=255)
                                                                                              tgcttcCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTCCCGCGCCCGTCGCGAAGACCCGt  >  1:1509991/1‑101 (MQ=255)
                                                                                                  |                                                                                                
GATCTTTCTGGTATGGATGTAGCGCGTAAGCTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTGCCCGCAGAGTTTAACGCTGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAGCTCGACGATCTCTTTGCCGCGCGCGTGGCGAAGGCCCGT  >  74/18793‑18987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: