BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	36	7,804	T→C	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	36	7,804	0	T	C	100.0%	434.3 / NA	119	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (69/50); total (69/50)

Only 100 of 121 total aligned reads displayed.

ATCACGGAGCATGCATACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATATGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATGAGACAGGTTAA  >  36/7709‑7901

aTCACGGAGCATGCATACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGa                                                                                              <  2:1383921/101‑1 (MQ=255)

aTCACGGAGCATGCATACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGa                                                                                              >  1:1040117/1‑101 (MQ=255)

  cACGGAGCATGCATACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGAtt                                                                                            >  2:197152/1‑101 (MQ=255)

       aGCATGCATACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTaaa                                                                                       >  2:1560349/1‑101 (MQ=255)

        gcatgcatACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTaaaa                                                                                      >  2:1235842/1‑101 (MQ=255)

        gcatgcatACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTaaaa                                                                                      >  2:568486/1‑101 (MQ=255)

        gcatgcatACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTaaaa                                                                                      >  2:1657645/1‑101 (MQ=255)

        gcatgcatACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTaaaa                                                                                      >  2:151606/1‑101 (MQ=255)

         catgcatACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTaaaaa                                                                                     >  1:1543468/1‑101 (MQ=255)

          atgcatACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTaaaaaa                                                                                    >  2:243320/1‑101 (MQ=255)

           tgcatACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAg                                                                                   >  1:1418316/1‑101 (MQ=255)

           tgcatACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAg                                                                                   <  2:1572642/101‑1 (MQ=255)

           tgcatACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAg                                                                                   >  1:114089/1‑101 (MQ=255)

            gcatACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGt                                                                                  <  1:858342/101‑1 (MQ=255)

            gcatACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGt                                                                                  <  2:1668481/101‑1 (MQ=255)

              atACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGtct                                                                                >  2:169689/1‑101 (MQ=255)

              atACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGtct                                                                                >  1:358096/1‑101 (MQ=255)

              atACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGtct                                                                                >  1:1091273/1‑101 (MQ=255)

              atACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGtct                                                                                >  1:560640/1‑101 (MQ=255)

                aCTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTcc                                                                              >  2:427840/1‑101 (MQ=255)

                 cTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCa                                                                             <  1:1009564/101‑1 (MQ=255)

                 cTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCa                                                                             <  2:1349399/101‑1 (MQ=255)

                  tttATCTTTTCAGAATCACCAAGATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAg                                                                            >  2:331696/1‑101 (MQ=255)

                  tttATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAg                                                                            >  1:158924/1‑101 (MQ=255)

                  tttATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAg                                                                            >  1:1165185/1‑101 (MQ=255)

                    tATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAgaa                                                                          >  2:583773/1‑101 (MQ=255)

                       cTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAgaatcg                                                                       <  1:1364197/101‑1 (MQ=255)

                       cTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAgaatcg                                                                       <  1:1526858/101‑1 (MQ=255)

                            cAGAATCATCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGaatcgaatcg                                                                  >  1:598948/1‑101 (MQ=255)

                                aTCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGa                                                              >  2:573653/1‑101 (MQ=255)

                                aTCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGa                                                              <  1:267509/101‑1 (MQ=255)

                                 tCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGAc                                                             >  1:671493/1‑101 (MQ=255)

                                  cACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGAcc                                                            >  1:1214147/1‑101 (MQ=255)

                                     cAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGgt                                                         >  1:1239184/1‑101 (MQ=255)

                                       aaaTATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGgtgt                                                       >  2:573796/1‑101 (MQ=255)

                                         atatTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTaa                                                     >  2:550465/1‑101 (MQ=255)

                                          tatTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAg                                                    >  2:816553/1‑101 (MQ=255)

                                          tatTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAg                                                    >  1:1088069/1‑101 (MQ=255)

                                           atTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAgg                                                   >  1:741477/1‑101 (MQ=255)

                                            ttGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGt                                                  <  2:162588/101‑1 (MQ=255)

                                            ttGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGt                                                  >  1:316062/1‑101 (MQ=255)

                                            ttGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGt                                                  >  2:906489/1‑101 (MQ=255)

                                              gCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTa                                                <  2:370909/101‑1 (MQ=255)

                                               cATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGCTaa                                               >  1:232890/1‑101 (MQ=255)

                                                aTTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAAc                                              >  2:846409/1‑101 (MQ=255)

                                                aTTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAAc                                              >  1:91873/1‑101 (MQ=255)

                                                aTTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAAc                                              >  1:1473929/1‑101 (MQ=255)

                                                aTTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAAc                                              >  1:747024/1‑101 (MQ=255)

                                                aTTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAAc                                              >  2:234136/1‑101 (MQ=255)

                                                 ttCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACt                                             >  2:584519/1‑101 (MQ=255)

                                                   tttttATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACttt                                           <  2:358096/100‑1 (MQ=255)

                                                   cTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACttt                                           <  1:316883/101‑1 (MQ=255)

                                                     tttATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTg                                         <  2:253323/101‑1 (MQ=255)

                                                     tttATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTg                                         <  2:1534342/101‑1 (MQ=255)

                                                     tttATTAAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTg                                         >  1:1487395/1‑101 (MQ=255)

                                                      ttattaAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGc                                        <  2:114089/101‑1 (MQ=255)

                                                      ttattaAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGc                                        >  1:196759/1‑101 (MQ=255)

                                                       tattaAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACATTTGca                                       >  1:1447302/1‑101 (MQ=255)

                                                          taAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAGAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGcatca                                    >  2:1499884/1‑101 (MQ=255)

                                                          taAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGcatca                                    <  2:312991/101‑1 (MQ=255)

                                                          taAAACACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGcatca                                    <  1:568491/101‑1 (MQ=255)

                                                           aaaaCACCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGcatcat                                   >  1:1327395/1‑101 (MQ=255)

                                                                acCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAg                              >  2:967445/1‑101 (MQ=255)

                                                                acCAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAg                              >  2:402818/1‑101 (MQ=255)

                                                                 ccAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAgg                             <  2:1507779/101‑1 (MQ=255)

                                                                  cAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGa                            <  1:331696/101‑1 (MQ=255)

                                                                  cAATCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGa                            <  2:1091268/101‑1 (MQ=255)

                                                                    aTCCAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAAt                          >  2:1450028/1‑101 (MQ=255)

                                                                      ccAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCa                        <  2:970008/101‑1 (MQ=255)

                                                                       cAGTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCaa                       <  1:573658/101‑1 (MQ=255)

                                                                         gTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATa                     <  2:1101186/101‑1 (MQ=255)

                                                                         gTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATa                     >  2:48429/1‑101 (MQ=255)

                                                                         gTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATa                     <  1:184949/101‑1 (MQ=255)

                                                                         gTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATa                     >  1:824403/1‑101 (MQ=255)

                                                                         gTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATa                     >  2:879648/1‑101 (MQ=255)

                                                                         gTATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATa                     >  1:1499566/1‑101 (MQ=255)

                                                                          tATTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATaa                    <  1:324374/101‑1 (MQ=255)

                                                                           aTTCTTACATCATTAATATACGGGGGTTTTAAAAAAGTGTCCAGAATCGAATCGATGACCGGAGTAAGGTTAACTTTTGCATCATCTAAGGAATAAATAAg                   >  1:980689/1‑101 (MQ=255)

                                                                           aTTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGTCCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAg                   >  1:1389644/1‑101 (MQ=255)

                                                                           aTTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAg                   <  2:864622/101‑1 (MQ=255)

                                                                           aTTCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAg                   >  1:1271487/1‑101 (MQ=255)

                                                                             tCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGaa                 <  2:1093025/101‑1 (MQ=255)

                                                                             tCTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGaa                 <  1:1586384/101‑1 (MQ=255)

                                                                              cTTACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAat                >  2:953960/1‑101 (MQ=255)

                                                                               ttACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAata               <  2:1543462/101‑1 (MQ=255)

                                                                               ttACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAata               >  1:1037626/1‑101 (MQ=255)

                                                                                tACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAatat              >  1:62386/1‑101 (MQ=255)

                                                                                tACATCATTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAatat              <  2:1634559/101‑1 (MQ=255)

                                                                                   atcatTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATgag           >  2:349051/1‑101 (MQ=255)

                                                                                   atcatTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATgag           <  2:1179938/101‑1 (MQ=255)

                                                                                   atcatTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATgag           <  1:1555233/101‑1 (MQ=255)

                                                                                    tcatTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATgaga          <  1:1345986/101‑1 (MQ=255)

                                                                                    tcatTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATgaga          >  2:872877/1‑101 (MQ=255)

                                                                                     catTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATGAGAc         >  2:112980/1‑101 (MQ=255)

                                                                                     catTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATGAGAc         >  2:1018141/1‑101 (MQ=255)

                                                                                      atTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATGAGACa        <  2:1020592/101‑1 (MQ=255)

                                                                                      atTAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATGAGACa        <  2:1473923/101‑1 (MQ=255)

                                                                                        tAATATACGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATGAGACAgg      <  2:39544/101‑1 (MQ=255)

                                                                                          atatacGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATGAGACAGGtt    <  2:1214142/101‑1 (MQ=255)

                                                                                            atacGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATGAGACAGGTTaa  >  1:267936/1‑101 (MQ=255)

ATCACGGAGCATGCATACTTTATCTTTTCAGAATCACCAAAATATTGCATTCTTTTATTAAAACACCAATCCAGTATTCTTACATCATTAATATATGGGGATTTTAAAAAAGTCTCCAGAATCGAATCGATGACCGGTGTAAGGTTAACTTTTGCATCATCTAAGGAATCAATAAGAATATGAGACAGGTTAA  >  36/7709‑7901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`