New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 82 | 11966 = | 1 (0.020) | 83 (1.310) +TGTAC |
65/190 | -0.0 | 98.3% | intergenic (–/–) | –/– | –/– |
? | 92 | = 500 | 2 (0.030) | intergenic (–/–) | –/– | –/– |
ATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGCGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAG > 92/400‑600 | atatGCGCCAGCGTTACTTCATCTTCTTTACTGCCCGCTTGCGCCGCTTTCCCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGAt < 1:732021/101‑1 (MQ=255) atatGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGAt > 2:161951/1‑101 (MQ=255) gcgcCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtac > 2:1097798‑M2/1‑97 (MQ=255) gcCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacac > 2:478959‑M2/1‑95 (MQ=255) gcCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacac < 2:1454257‑M2/101‑7 (MQ=255) cAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaa < 2:1344621‑M2/101‑9 (MQ=255) cAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCCGATTGGTGATgtacacaa < 1:247133‑M2/101‑9 (MQ=255) aGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaac < 2:731081‑M2/101‑10 (MQ=255) gTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccga < 2:55516‑M2/101‑13 (MQ=255) gTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccga < 1:233575‑M2/101‑13 (MQ=255) ttACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgag > 1:1611485‑M2/1‑88 (MQ=255) tACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGGTgtacacaaccggga < 2:842011‑M2/101‑15 (MQ=255) tctTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagac > 2:490923‑M2/2‑86 (MQ=255) aCTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagac < 2:995580‑M2/101‑16 (MQ=255) aCTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagac < 1:1204882‑M2/101‑16 (MQ=255) cTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagact < 1:1589108‑M2/101‑17 (MQ=255) cTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagact < 1:1312611‑M2/101‑17 (MQ=255) ttCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagactt < 1:411984‑M2/101‑18 (MQ=255) tCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttc < 2:72346‑M2/101‑19 (MQ=255) ccctTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaa > 2:354718‑M2/2‑81 (MQ=255) aCCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaa < 1:1351245‑M2/101‑21 (MQ=255) cttcttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatg < 2:1016606‑M2/101‑23 (MQ=255) cttcttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatg < 2:369584‑M2/101‑23 (MQ=255) ttcttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAgcgcgc > 1:1339973/1‑101 (MQ=255) tcttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtt > 2:511410‑M2/1‑77 (MQ=255) tcttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtt > 2:590690‑M2/1‑77 (MQ=255) cttTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgttt < 1:1061164‑M2/101‑26 (MQ=255) tttACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgttta > 1:1172556‑M2/1‑75 (MQ=255) tttACTACCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgttta > 1:1050242‑M2/1‑75 (MQ=255) ttACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcactgtttaa > 1:1043214‑M2/1‑74 (MQ=255) ttACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaa > 1:1248143‑M2/1‑74 (MQ=255) ttACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaa > 2:79407‑M2/1‑74 (MQ=255) cTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaagga < 2:359241‑M2/101‑31 (MQ=255) cTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaacgagacttcaatgtttaagga < 1:1326414‑M2/101‑31 (MQ=255) cccGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattc < 2:818307‑M2/101‑34 (MQ=255) cTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagt > 1:1355972‑M2/1‑64 (MQ=255) ttGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagtt > 1:868927‑M2/1‑63 (MQ=255) gcgcCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcc > 2:879248‑M2/1‑61 (MQ=255) gccgcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctg > 1:1515415‑M2/1‑59 (MQ=255) ccgcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattcccgttcctgg < 2:131773‑M2/101‑44 (MQ=255) ccgcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctgg > 2:996114‑M2/1‑58 (MQ=255) ccgcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctgg < 1:184685‑M2/101‑44 (MQ=255) gcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggtt < 1:1714206‑M2/101‑46 (MQ=255) gcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGCGCAGGCATCAGCATCACCGCTGTc < 2:1339967/101‑1 (MQ=255) cTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggtta < 1:825873‑M2/101‑47 (MQ=255) cTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggtta > 2:938805‑M2/1‑55 (MQ=255) tttCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttat > 1:983194‑M2/1‑54 (MQ=255) tttCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttat > 2:570708‑M2/1‑54 (MQ=255) tttCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttat < 1:941698‑M2/101‑48 (MQ=255) ctctGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatcct > 2:1084295‑M2/1‑51 (MQ=255) ctctGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatcct < 2:1573703‑M2/101‑51 (MQ=255) ctctGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatcct < 2:1092938‑M2/101‑51 (MQ=255) tctGCAAGAACTTTTGCTTTTGGATAGTCCAGACTGACCTGATTGGTGATgtacacaaccgagacttcaatttttaaggattccagttcctggttatcctt > 2:1705551‑M2/1‑50 (MQ=255) ctGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttc > 2:139761‑M2/1‑49 (MQ=255) tGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTTGTGATgtacacaaccgagacttcaatgcttaaggattccagctcctggttctccttca < 1:480682‑M2/101‑54 (MQ=255) tGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcg > 2:479431‑M2/1‑48 (MQ=255) cAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgca < 2:916062‑M2/101‑56 (MQ=255) aGAACTTTTGCTTGTGGATAGGCCAGACTGACCGGATTGGTGGTgtacacaaccgagacttcaatgtttaaggattccagttcctggttattcatcgcatc < 2:1536051‑M2/101‑58 (MQ=255) gAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatca > 2:1011782‑M2/1‑43 (MQ=255) gAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatca > 1:1350523‑M2/1‑43 (MQ=255) ttttGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaact > 1:19768‑M2/1‑39 (MQ=255) tttGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactc < 2:1099435‑M2/101‑64 (MQ=255) tttGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactc > 2:1589102‑M2/1‑38 (MQ=255) tttGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactc < 2:78007‑M2/101‑64 (MQ=255) gCTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttc > 1:1546130‑M2/1‑35 (MQ=255) cTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcg > 1:869876‑M2/1‑34 (MQ=255) cTTGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcg < 2:761088‑M2/101‑68 (MQ=255) ttGTGGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgt > 1:369584‑M2/1‑33 (MQ=255) tgtgGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtg < 2:950460‑M2/101‑70 (MQ=255) gtgGATAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgc < 1:735626‑M2/101‑71 (MQ=255) aTAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaact < 1:1139758‑M2/101‑75 (MQ=255) aTAGTCCAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaact < 1:1192051‑M2/101‑75 (MQ=255) cAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcag < 2:1479060‑M2/101‑81 (MQ=255) cAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcag > 1:56265‑M2/1‑21 (MQ=255) cAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcag > 2:1071909‑M2/1‑21 (MQ=255) cAGACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcag < 2:438103‑M2/101‑81 (MQ=255) gACTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagag > 1:961374‑M2/1‑19 (MQ=255) aCTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagagg < 1:782822‑M2/101‑84 (MQ=255) cTGACCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggt < 1:1440411‑M2/101‑85 (MQ=255) aCCGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatg < 2:27770‑M2/101‑88 (MQ=255) cGGATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggt > 1:1123350‑M2/1‑12 (MQ=255) ggATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtc < 1:129327‑M2/101‑91 (MQ=255) ggATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtc > 1:358828‑M2/1‑11 (MQ=255) gATTGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtcg > 2:411979‑M2/1‑10 (MQ=255) tGGTGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgaaaatgatcagaggtatggtcgcgg < 2:436394‑M2/101‑95 (MQ=255) tGATgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtcgcggcga < 1:1328318‑M2/101‑98 (MQ=255) aTgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtcgcggcgaaa < 1:790887‑M2/101‑100 (MQ=255) tgtacacaaccgagacttcaatgtttaaggattccagttcctggttatccttcgcatcaaactcttcgtgcaactgctcagaggtatggtcgcggcgaaaa > 1:818312‑M2/1‑1 (MQ=255) | ATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCAGACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGCGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAG > 92/400‑600 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |