New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 68 | 1 = | 0 (0.000) | 52 (0.780) | 40/200 | 0.5 | 100% | intergenic (–/–) | –/– | –/– |
? | 7 | = 59421 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TTAACAGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 7/59322‑59421 | ttAACAGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTc > 1:106924‑M2/1‑100 (MQ=255) tAACAGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTca < 2:1510563‑M2/101‑3 (MQ=255) cAGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtc < 2:776129‑M2/101‑6 (MQ=255) aGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtct < 2:1020874‑M2/101‑7 (MQ=255) gCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctg > 2:937803‑M2/1‑94 (MQ=255) ctctTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctgg > 1:25285‑M2/1‑93 (MQ=255) ctctTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctgg < 2:1049965‑M2/101‑9 (MQ=255) ctctTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctgg < 2:332231‑M2/101‑9 (MQ=255) ctctTCCAGCCCACGGGCCGTACTGGCAAACAAAAAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctgg < 2:1687355‑M2/101‑9 (MQ=255) tCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGTCGTAATTGTTGCAGTcagtctggacat > 1:1659328‑M2/1‑89 (MQ=255) gggCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcg < 1:411528‑M2/101‑23 (MQ=255) gggCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcg < 2:1108799‑M2/101‑23 (MQ=255) ccGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggag < 2:507990‑M2/101‑26 (MQ=255) cTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaacc > 2:1294643‑M2/1‑71 (MQ=255) cTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaacc < 1:1575474‑M2/101‑31 (MQ=255) cTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaacc > 1:919076‑M2/1‑71 (MQ=255) ggCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctgtacatggacagcgcggagaaaccgg > 1:105308‑M2/1‑69 (MQ=255) aaaCAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagc > 1:1453210‑M2/1‑66 (MQ=255) aaCAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcg < 2:40266‑M2/101‑37 (MQ=255) aCAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgt < 1:929173‑M2/101‑38 (MQ=255) aCAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgt < 1:1619404‑M2/101‑38 (MQ=255) agagAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtac < 1:1004651‑M2/101‑40 (MQ=255) aTTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaag < 2:1314131‑M2/101‑45 (MQ=255) aTTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaag < 2:514293‑M2/101‑45 (MQ=255) cATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtac > 1:1034637‑M2/1‑54 (MQ=255) cATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtac > 1:404836‑M2/1‑54 (MQ=255) tCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtga < 2:1341523‑M2/101‑52 (MQ=255) tACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgag > 1:1549120‑M2/1‑40 (MQ=255) tctAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcat > 2:663556‑M2/1‑37 (MQ=255) tctAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcat < 1:1155438‑M2/101‑65 (MQ=255) tctAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcat > 2:1372265‑M2/1‑37 (MQ=255) tctAAGAGACTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcat < 1:1570860‑M2/101‑65 (MQ=255) ctAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcata < 2:863302‑M2/101‑66 (MQ=255) ctAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcata > 1:1287559‑M2/1‑36 (MQ=255) aaGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataac < 2:378500‑M2/101‑68 (MQ=255) aaGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataac > 2:432562‑M2/1‑34 (MQ=255) agagCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacc < 2:150316‑M2/101‑69 (MQ=255) agagCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacc < 2:379376‑M2/101‑69 (MQ=255) agCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataaccca > 1:1510569‑M2/1‑31 (MQ=255) cTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccaggg > 1:1113467‑M2/1‑28 (MQ=255) aGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaact > 2:952636‑M2/1‑21 (MQ=255) aGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaact < 2:1276280‑M2/101‑81 (MQ=255) aGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaact < 1:1112285‑M2/101‑81 (MQ=255) aGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgac > 1:514298‑M2/1‑18 (MQ=255) ggCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgaca < 1:583360‑M2/101‑85 (MQ=255) gCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaa > 2:1265778‑M2/1‑16 (MQ=255) gTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaat < 2:859646‑M2/101‑88 (MQ=255) gTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaat < 1:1078984‑M2/101‑88 (MQ=255) tAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaata > 1:643689‑M2/1‑13 (MQ=255) aaTTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaataa > 1:379381‑M2/1‑12 (MQ=255) tgttgCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaataaaat > 1:1314137‑M2/1‑9 (MQ=255) gtcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaataaaatagcctaa < 2:650783‑M2/101‑100 (MQ=255) | TTAACAGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 7/59322‑59421 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |