New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 68 1 =0 (0.000)52 (0.780) 40/200 0.5 100% intergenic (–/–) –/– –/–
?7 = 59421 0 (0.000)intergenic (–/–) –/– –/–

TTAACAGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  7/59322‑59421
                                                                                                   |                                                                                                   
ttAACAGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTc                                                                                                    >  1:106924‑M2/1‑100 (MQ=255)
 tAACAGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTca                                                                                                   <  2:1510563‑M2/101‑3 (MQ=255)
    cAGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtc                                                                                                <  2:776129‑M2/101‑6 (MQ=255)
     aGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtct                                                                                               <  2:1020874‑M2/101‑7 (MQ=255)
      gCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctg                                                                                              >  2:937803‑M2/1‑94 (MQ=255)
       ctctTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctgg                                                                                             >  1:25285‑M2/1‑93 (MQ=255)
       ctctTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctgg                                                                                             <  2:1049965‑M2/101‑9 (MQ=255)
       ctctTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctgg                                                                                             <  2:332231‑M2/101‑9 (MQ=255)
       ctctTCCAGCCCACGGGCCGTACTGGCAAACAAAAAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctgg                                                                                             <  2:1687355‑M2/101‑9 (MQ=255)
           tCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGTCGTAATTGTTGCAGTcagtctggacat                                                                                         >  1:1659328‑M2/1‑89 (MQ=255)
                     gggCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcg                                                                               <  1:411528‑M2/101‑23 (MQ=255)
                     gggCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcg                                                                               <  2:1108799‑M2/101‑23 (MQ=255)
                        ccGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggag                                                                            <  2:507990‑M2/101‑26 (MQ=255)
                             cTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaacc                                                                       >  2:1294643‑M2/1‑71 (MQ=255)
                             cTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaacc                                                                       <  1:1575474‑M2/101‑31 (MQ=255)
                             cTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaacc                                                                       >  1:919076‑M2/1‑71 (MQ=255)
                               ggCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctgtacatggacagcgcggagaaaccgg                                                                     >  1:105308‑M2/1‑69 (MQ=255)
                                  aaaCAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagc                                                                  >  1:1453210‑M2/1‑66 (MQ=255)
                                   aaCAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcg                                                                 <  2:40266‑M2/101‑37 (MQ=255)
                                    aCAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgt                                                                <  1:929173‑M2/101‑38 (MQ=255)
                                    aCAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgt                                                                <  1:1619404‑M2/101‑38 (MQ=255)
                                      agagAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtac                                                              <  1:1004651‑M2/101‑40 (MQ=255)
                                           aTTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaag                                                         <  2:1314131‑M2/101‑45 (MQ=255)
                                           aTTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaag                                                         <  2:514293‑M2/101‑45 (MQ=255)
                                              cATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtac                                                      >  1:1034637‑M2/1‑54 (MQ=255)
                                              cATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtac                                                      >  1:404836‑M2/1‑54 (MQ=255)
                                                  tCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtga                                                  <  2:1341523‑M2/101‑52 (MQ=255)
                                                            tACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgag                                        >  1:1549120‑M2/1‑40 (MQ=255)
                                                               tctAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcat                                     >  2:663556‑M2/1‑37 (MQ=255)
                                                               tctAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcat                                     <  1:1155438‑M2/101‑65 (MQ=255)
                                                               tctAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcat                                     >  2:1372265‑M2/1‑37 (MQ=255)
                                                               tctAAGAGACTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcat                                     <  1:1570860‑M2/101‑65 (MQ=255)
                                                                ctAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcata                                    <  2:863302‑M2/101‑66 (MQ=255)
                                                                ctAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcata                                    >  1:1287559‑M2/1‑36 (MQ=255)
                                                                  aaGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataac                                  <  2:378500‑M2/101‑68 (MQ=255)
                                                                  aaGAGCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataac                                  >  2:432562‑M2/1‑34 (MQ=255)
                                                                   agagCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacc                                 <  2:150316‑M2/101‑69 (MQ=255)
                                                                   agagCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacc                                 <  2:379376‑M2/101‑69 (MQ=255)
                                                                     agCCTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataaccca                               >  1:1510569‑M2/1‑31 (MQ=255)
                                                                        cTACCGCAGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccaggg                            >  1:1113467‑M2/1‑28 (MQ=255)
                                                                               aGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaact                     >  2:952636‑M2/1‑21 (MQ=255)
                                                                               aGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaact                     <  2:1276280‑M2/101‑81 (MQ=255)
                                                                               aGTAGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaact                     <  1:1112285‑M2/101‑81 (MQ=255)
                                                                                  aGGCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgac                  >  1:514298‑M2/1‑18 (MQ=255)
                                                                                   ggCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgaca                 <  1:583360‑M2/101‑85 (MQ=255)
                                                                                    gCGTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaa                >  2:1265778‑M2/1‑16 (MQ=255)
                                                                                      gTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaat              <  2:859646‑M2/101‑88 (MQ=255)
                                                                                      gTAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaat              <  1:1078984‑M2/101‑88 (MQ=255)
                                                                                       tAATTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaata             >  1:643689‑M2/1‑13 (MQ=255)
                                                                                        aaTTGTTGCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaataa            >  1:379381‑M2/1‑12 (MQ=255)
                                                                                           tgttgCAGTcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaataaaat         >  1:1314137‑M2/1‑9 (MQ=255)
                                                                                                  gtcagtctggacatggacagcgcggagaaaccggagcgtacacaagtacgtgaggatttcgagcataacccagggccaaactgacaaataaaatagcctaa  <  2:650783‑M2/101‑100 (MQ=255)
                                                                                                   |                                                                                                   
TTAACAGCTCTTCCAGCCCACGGGCCGTACTGGCAAACAGAGAATTCATATCGTCACTTTTACTCTAAGAGCCTACCGCAGTAGGCGTAATTGTTGCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  7/59322‑59421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.