| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 38 | = 21258 | 25 (0.380) | 56 (0.850) | 37/198 | 0.8 | 81.9% | intergenic (–/–) | –/– | –/– |
| ? | 79 | = 21232 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
AAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 79/21134‑21233 | aaGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTga > 1:1349002‑M2/1‑99 (MQ=255) aGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaa < 1:88029‑M2/101‑4 (MQ=255) aGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaa < 1:800332‑M2/101‑4 (MQ=255) aGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaa > 2:771385‑M2/1‑98 (MQ=255) gAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaat > 1:338068‑M2/1‑97 (MQ=255) gAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaat > 1:1018215‑M2/1‑97 (MQ=255) gAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaat > 1:1350019‑M2/1‑97 (MQ=255) aaGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgc > 1:25067‑M2/1‑95 (MQ=255) aGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcc < 2:527668‑M2/101‑8 (MQ=255) tGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatg < 2:471312‑M2/101‑13 (MQ=255) gCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcg > 2:51035‑M2/1‑87 (MQ=255) cTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcga < 2:174827‑M2/101‑16 (MQ=255) tGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgc > 2:640281‑M1/1‑77 (MQ=255) gAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcg < 2:428174‑M1/101‑26 (MQ=255) aGTGCTGGGCAAATTTGATAAAACTGCGGATAAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtc > 1:1095977‑M1/1‑74 (MQ=255) gTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtct > 2:737754‑M1/1‑73 (MQ=255) tGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtctt > 2:942974‑M1/1‑72 (MQ=255) gggCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttctca < 2:1083830‑M1/101‑34 (MQ=255) gggCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatca < 1:443147‑M1/101‑34 (MQ=255) gggCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatca < 2:1506601‑M1/101‑34 (MQ=255) gggCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatca < 2:590900‑M1/101‑34 (MQ=255) cAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatcaggc > 1:105502‑M1/1‑65 (MQ=255) aaaTTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatcaggcc > 1:1536938‑M1/1‑64 (MQ=255) aTTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatcaggccta > 2:223247‑M1/1‑62 (MQ=255) tGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgc > 1:358803‑M1/1‑59 (MQ=255) aTAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgcca > 2:68051‑M1/1‑57 (MQ=255) aaaCTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagac < 2:215340‑M2/101‑49 (MQ=255) aaaCTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagac < 2:758491‑M2/101‑49 (MQ=255) aaaCTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagac < 1:318935‑M2/101‑49 (MQ=255) aCTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacag < 1:1181803‑M2/101‑51 (MQ=255) aCTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacag > 2:1434153‑M2/1‑51 (MQ=255) cTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagc > 1:522837‑M2/1‑50 (MQ=255) ggATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaa < 2:1305503‑M2/101‑56 (MQ=255) gATCAATAATTGAAGATTGCCGGGGATATCGCCGAGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgcaagacagcgcaat > 2:510865‑M2/1‑45 (MQ=255) gATCAATAATTGAAGATTGCCGGGGATATCCGCCCGGCAATGTGTgaatgcctgatgcgacgctggccgcgtcttatcaggcctacgccagacagcgcaat > 1:1139369‑M2/1‑45 (MQ=255) ataatTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcct > 1:1395758‑M2/1‑40 (MQ=255) ataatTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcct < 2:1337663‑M2/101‑62 (MQ=255) aatTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctga > 2:35064‑M2/1‑38 (MQ=255) atTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgat > 2:1095972‑M2/1‑37 (MQ=255) atTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgat < 1:8417‑M2/101‑65 (MQ=255) atTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgat < 1:984225‑M2/101‑65 (MQ=255) tGAAGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgattt > 2:1539221‑M2/1‑35 (MQ=255) aaGATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttag < 1:536182‑M2/101‑69 (MQ=255) gATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcg < 1:1664545‑M2/101‑71 (MQ=255) gATTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcg < 2:1450111‑M2/101‑71 (MQ=255) aTTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgt < 1:735997‑M2/101‑72 (MQ=255) aTTGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgt < 1:1388482‑M2/101‑72 (MQ=255) tGCCGGGGATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtga < 2:723404‑M2/101‑74 (MQ=255) gggATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttg > 1:942979‑M2/1‑23 (MQ=255) gggATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttg > 2:479580‑M2/1‑23 (MQ=255) ggATATCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgt < 1:1153906‑M2/101‑80 (MQ=255) atatCCACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtag < 2:895533‑M2/101‑82 (MQ=255) ccACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcg < 1:1383461‑M2/101‑86 (MQ=255) ccACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcg < 2:851009‑M2/101‑86 (MQ=255) cACCCGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcgg < 1:288208‑M2/101‑87 (MQ=255) ccGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggata > 2:504619‑M2/1‑12 (MQ=255) cGGCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataa > 2:1643363‑M2/1‑11 (MQ=255) ggCAATGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataag < 1:212451‑M2/101‑92 (MQ=255) aTGTGTgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgt < 2:89975‑M2/101‑96 (MQ=255) gtgtgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgttt < 2:966525‑M2/101‑98 (MQ=255) gtgtgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgttt < 1:1391209‑M2/101‑98 (MQ=255) gtgtgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgttt > 1:1081790‑M2/1‑4 (MQ=255) gtgaatgcctgatgcgacgctttccgcgttttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgtttat > 2:1254750‑M2/1‑2 (MQ=255) gtgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgtttat > 1:640286‑M2/1‑2 (MQ=255) gtgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgtttat > 1:68051‑M2/1‑2 (MQ=255) gtgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgtttat > 1:557608‑M2/1‑2 (MQ=255) gtgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgtttat > 2:313431‑M2/1‑2 (MQ=255) gtgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgtttat > 2:105502‑M2/1‑2 (MQ=255) gtgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgtttat < 2:720482‑M2/101‑100 (MQ=255) gtgaatgcctgatgcgacgcttgccgcgtcttatcaggcctacgccagacagcgcaatagcctgatttagcgtgattttgtaggtcggataaggcgtttat > 2:88029‑M2/1‑2 (MQ=255) | AAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 79/21134‑21233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |