New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 38 | 21218 = | 53 (0.800) | 44 (0.770) | 40/172 | 0.2 | 65.9% | intergenic (–/–) | –/– | –/– |
? | 39 | = 32788 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGGCCTGATAAG > 39/32689‑32802 | ttAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAAAGCCTCATCCGCCCTGGACAAATGGGACGAACGg < 2:1227385‑M2/101‑2 (MQ=255) tAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACAACTCATCCGCCCTGGACAAATGGTACGAGCGgt < 1:997663‑M2/101‑3 (MQ=255) aaCCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgta < 2:377634‑M2/101‑4 (MQ=255) aCCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGGGGCATAAACGCCTCATCCGCCCTGGACAAATGGAACGAGCGgtag < 1:550243‑M2/101‑5 (MQ=255) gTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctg < 2:1001409‑M2/101‑10 (MQ=255) gTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctg < 1:402261‑M2/101‑10 (MQ=255) tATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgat > 1:315698‑M2/1‑90 (MQ=255) aTCCGTCCGCGTTTGAAGTTTCATTAATCGACGTACACTGTCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgata > 2:1550101‑M2/1‑89 (MQ=255) aTCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgata > 1:1670655‑M2/1‑89 (MQ=255) cgtccgCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataaga > 2:276749‑M2/1‑86 (MQ=255) gtccgCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagac > 1:107310‑M2/1‑85 (MQ=255) ccgCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgc > 1:408846‑M2/1‑83 (MQ=255) gcgTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgt > 2:1357794‑M2/1‑81 (MQ=255) gcgTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgt < 2:550688‑M2/101‑21 (MQ=255) cgTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgtt < 1:700831‑M2/101‑22 (MQ=255) tttGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaa > 2:1424399‑M2/1‑78 (MQ=255) ttGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaag > 1:779580‑M2/1‑77 (MQ=255) tGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagc > 2:1561879‑M2/1‑76 (MQ=255) tGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagc < 2:1091642‑M2/101‑26 (MQ=255) aaGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgt < 2:728998‑M2/101‑28 (MQ=255) aaGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgt < 2:782864‑M2/101‑28 (MQ=255) aGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtc > 1:1718332‑M2/1‑73 (MQ=255) aGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtc > 2:1618505‑M2/1‑73 (MQ=255) gCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcat > 1:1568804‑M2/1‑69 (MQ=255) tAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcagg < 1:898710‑M2/101‑37 (MQ=255) aaTCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggc < 1:1390308‑M2/101‑38 (MQ=255) tCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcat < 2:1220816‑M2/101‑40 (MQ=255) tCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcat > 1:449197‑M2/1‑62 (MQ=255) cGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcatt < 1:1384226‑M2/101‑41 (MQ=255) gTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattcctt < 1:1023035‑M2/101‑45 (MQ=255) acacTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttca > 1:29297‑M2/1‑55 (MQ=255) cacTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcag > 2:573242‑M2/1‑54 (MQ=255) tGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagact < 1:1572017‑M2/101‑51 (MQ=255) ggATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctc > 2:526236‑M2/1‑47 (MQ=255) aTAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcatt < 1:1098144‑M2/101‑64 (MQ=255) aTAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcatt < 2:1204026‑M2/101‑64 (MQ=255) tAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcatta > 2:323282‑M2/1‑37 (MQ=255) tAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcatta < 1:1714200‑M2/101‑65 (MQ=255) aaaCGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaa > 1:640684‑M2/1‑36 (MQ=255) aCGCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagt < 1:1319901‑M2/101‑68 (MQ=255) aCGCCTCATCCGCCCTGGACAAATGGTACGAGCGataggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagt > 1:85198‑M2/1‑34 (MQ=255) gCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtat < 2:79922‑M2/101‑70 (MQ=255) gCCTCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtat > 1:1139923‑M2/1‑32 (MQ=255) tCATCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtatttc > 2:25229‑M2/1‑29 (MQ=255) tCCGCCCTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtatttccag < 1:1566496‑M2/101‑76 (MQ=255) ccTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtatttccagccatt > 2:1098139‑M2/1‑21 (MQ=255) cTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtatttccagccattc < 1:1274391‑M2/101‑82 (MQ=255) cTGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtatttccagccattc < 2:1702985‑M2/101‑82 (MQ=255) tGGACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtatttccagccattcc < 1:58960‑M2/101‑83 (MQ=255) ggACAAATGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtatttccagccattccc > 2:1296398‑M2/1‑18 (MQ=255) aaTGGTACGAGCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtatttccagccattcccgcgct > 1:1124012‑M2/1‑13 (MQ=255) gCGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtatttccagccattcccgcgcttttcatcttc > 1:478147‑M2/1‑3 (MQ=255) cGgtaggcctgataagacgcgttaagcgtcgcatcaggcattccttcagactcctccgaatcattaagtatttccagccattcccgcgcttttcatcttct < 1:194600‑M2/101‑100 (MQ=255) | TTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAATCGACGTACACTGGCGGATGTGGCATAAACGCCTCATCCGCCCTGGACAAATGGTACGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGGCCTGATAAG > 39/32689‑32802 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |