| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 25 | 1 = | 0 (0.000) | 45 (0.700) +TGCC |
38/192 | 0.5 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 33 | = 33871 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CGCGCCGATCCCCACCGAGCGCATACCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 33/33784‑33871 | cgcgCCGATCCCCACCGAGCGCATACCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagcc < 1:1229795‑M2/101‑14 (MQ=255)cgcgCCGATCCCCACCGAGCGCATACCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagcc > 1:1240835‑M2/1‑88 (MQ=255) ccGATCCCCACCGAGCGCATACCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgc < 1:1429857‑M2/101‑18 (MQ=255) ccGATCCCCACCGAGCGCATACCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgc > 1:246449‑M2/1‑84 (MQ=255) gATCCCCACCGAGCGCATACCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcac > 2:916709‑M2/1‑82 (MQ=255) aTCCCCACCGAGCGCATACCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcaca > 2:477893‑M2/1‑81 (MQ=255) cgcATACCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaa > 2:631885‑M2/1‑69 (MQ=255) ttaCCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagat > 1:1638490‑M2/2‑66 (MQ=255) aTACCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagat > 2:1590643‑M2/1‑66 (MQ=255) aTACCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagat < 1:735434‑M2/101‑36 (MQ=255) gCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagacctgcacaggcggcgagaaagatttccg < 2:964087‑M2/101‑41 (MQ=255) ggCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggt > 2:731951‑M2/1‑58 (MQ=255) cGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtcc > 1:1536683‑M2/1‑56 (MQ=255) cGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggccagaaagatttccggggcc < 2:1655711‑M2/101‑46 (MQ=255) cGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCAGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtcc > 2:1718623‑M2/1‑56 (MQ=255) gTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccg > 1:1351143‑M2/1‑55 (MQ=255) ttAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccgg > 1:833505‑M2/1‑54 (MQ=255) aaTGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCgggacgcccagccctgcacaggcggcgagaaagaattcccggtccgggt < 2:1590056‑M2/101‑50 (MQ=255) aaTGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtt > 2:1313131‑M2/1‑52 (MQ=255) cGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgag > 2:365584‑M2/1‑47 (MQ=255) cAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgggaaagatttccgggtccggcttcgagttt < 1:285191‑M2/101‑58 (MQ=255) tGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagttttta > 1:1695247‑M2/1‑41 (MQ=255) gCCGGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcataggcggcgagaaagatttccgggtccggtttcgagtttttaa > 1:868496‑M2/1‑40 (MQ=255) gCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaa > 2:3999‑M2/1‑40 (MQ=255) gCCTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttg > 1:257123‑M2/1‑36 (MQ=255) cTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttggg < 1:1563563‑M2/101‑68 (MQ=255) cTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttggg < 2:549337‑M2/101‑68 (MQ=255) cTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttggg > 1:687452‑M2/1‑34 (MQ=255) cTGCGCATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttggg < 2:283659‑M2/101‑68 (MQ=255) cgcATCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaag > 1:922764‑M2/1‑31 (MQ=255) gcATCTTCAATGCCGATACATGCCTGCGGCggcacgcccatccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagc > 1:1448832‑M2/1‑30 (MQ=255) aTCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagcaagatttccgggtccggtttcgagtttttaagttgggaagcat < 1:801495‑M2/101‑74 (MQ=255) aTCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcat > 1:161658‑M2/1‑28 (MQ=255) aTCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcat < 2:1285468‑M2/101‑74 (MQ=255) aTCTTCAATGCCGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcat < 2:642127‑M2/101‑74 (MQ=255) cGATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcatccgcgcagaag > 2:149340‑M2/1‑17 (MQ=255) gATACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcatccgcgcagaagg > 1:156899‑M2/1‑16 (MQ=255) aTACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcatccgcgcagaaggt < 1:658928‑M2/101‑87 (MQ=255) aTACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcatccgcgcagaaggt > 1:388565‑M2/1‑15 (MQ=255) tACATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcatccgcgcagaaggtg > 1:546644‑M2/1‑14 (MQ=255) cATGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcatccgcgcagaaggtgaa > 2:945616‑M2/1‑12 (MQ=255) aTGCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcatccgcgcagaaggtgaaa < 2:386666‑M2/101‑91 (MQ=255) gCCTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcatccgcgcagaaggtgaaaaa > 2:801490‑M2/1‑9 (MQ=255) cTGCGGCggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcatccgcgcagaaggtgaaaaact < 2:917688‑M2/101‑95 (MQ=255) ggcggcacgcccagccctgcacaggcggcgagaaagatttccgggtccggtttcgagtttttaagttgggaagcatccgcgcagaaggtgaaaaactcgcg < 1:462147‑M2/101‑99 (MQ=255) | CGCGCCGATCCCCACCGAGCGCATACCGCTGGCGTTAATGGCGTCAATGCCCGCCTGCGCATCTTCAATGCCGATACATGCCTGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 33/33784‑33871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |