New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 223 = 6980 (0.000)48 (0.750)
+AGTT
36/192 1.1 100% intergenic (–/–) –/– –/–
?94 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAATTACCGC  >  94/1‑97
                                                                                     |                                                                                                
agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGAt                                                                                   >  2:738043‑M2/86‑101 (MQ=255)
agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGAt                                                                                   >  1:920244‑M2/86‑101 (MQ=255)
      tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTga                                                                             <  1:1356406‑M2/22‑1 (MQ=255)
      tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTga                                                                             >  1:1121901‑M2/80‑101 (MQ=255)
           aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcactaagttGGCAGCATCACCCGAATTTTGAGAGcc                                                                        >  2:654398‑M2/75‑101 (MQ=255)
              agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAgc                                                                     >  2:43733‑M2/72‑101 (MQ=255)
                      ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATg                                                             <  1:91360‑M2/38‑1 (MQ=255)
                      ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATg                                                             <  2:518298‑M2/38‑1 (MQ=255)
                       tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGt                                                            >  2:302374‑M2/63‑101 (MQ=255)
                        gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGtt                                                           <  1:1270715‑M2/40‑1 (MQ=255)
                        gaaagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGtt                                                           <  2:17834‑M2/40‑1 (MQ=255)
                          tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCa                                                         <  2:1224727‑M2/42‑1 (MQ=255)
                               acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAg                                                    >  1:1340978‑M2/55‑101 (MQ=255)
                                  gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTc                                                 <  1:1090978‑M2/50‑1 (MQ=255)
                                     gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACg                                              <  1:744431‑M2/53‑1 (MQ=255)
                                     gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACg                                              <  2:1288581‑M2/53‑1 (MQ=255)
                                      ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACgt                                             <  2:92716‑M2/54‑1 (MQ=255)
                                      ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACgt                                             <  2:1121896‑M2/54‑1 (MQ=255)
                                      ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACgt                                             >  1:1026978‑M2/48‑101 (MQ=255)
                                         ctggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCCCCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGtt                                          <  1:1220104‑M2/57‑1 (MQ=255)
                                          tggagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTc                                         <  2:934834‑M2/58‑1 (MQ=255)
                                            gagcacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCa                                       <  1:1130047‑M2/60‑1 (MQ=255)
                                               cacctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAg                                    <  2:323712‑M2/63‑1 (MQ=255)
                                                 cctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGt                                  <  1:1082662‑M2/65‑1 (MQ=255)
                                                 cctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGt                                  <  1:1123177‑M2/65‑1 (MQ=255)
                                                 cctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGt                                  >  2:744683‑M2/37‑101 (MQ=255)
                                                  ctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTc                                 >  1:1124688‑M2/36‑101 (MQ=255)
                                                  ctcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTc                                 >  1:258604‑M2/36‑101 (MQ=255)
                                                   tcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCg                                <  1:1007703‑M2/67‑1 (MQ=255)
                                                   tcaaaaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCg                                <  2:1704936‑M2/67‑1 (MQ=255)
                                                       aaacaccatcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATa                            <  1:215211‑M2/71‑1 (MQ=255)
                                                             catcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGgcgc                      >  2:1424495‑M2/25‑101 (MQ=255)
                                                              atcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCGAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGgcgcg                     >  2:901999‑M2/24‑101 (MQ=255)
                                                              atcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGgcgcg                     <  1:654975‑M2/78‑1 (MQ=255)
                                                              atcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGgcgcg                     >  1:1187303‑M2/24‑101 (MQ=255)
                                                              atcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGgcgcg                     >  2:1300205‑M2/24‑101 (MQ=255)
                                                               tcatacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGgcgcgc                    >  2:1522729‑M2/23‑101 (MQ=255)
                                                                catacactaaatcagtaagttGGCAGTATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCa                   <  2:258604‑M2/80‑1 (MQ=255)
                                                                 atacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCaa                  >  1:197857‑M2/21‑101 (MQ=255)
                                                                 atacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCaa                  >  1:919513‑M2/21‑101 (MQ=255)
                                                                  tacactaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAg                 >  2:314821‑M2/20‑101 (MQ=255)
                                                                      ctaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAAt             <  2:1067016‑M2/86‑1 (MQ=255)
                                                                      ctaaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAAt             <  2:70206‑M2/86‑1 (MQ=255)
                                                                       taaatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCCCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGTAAGGAATa            <  2:839859‑M2/87‑1 (MQ=255)
                                                                         aatcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGa          <  1:744688‑M2/89‑1 (MQ=255)
                                                                           tcagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAAt        <  1:1538161‑M2/91‑1 (MQ=255)
                                                                            cagtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAAtt       <  1:1593881‑M2/92‑1 (MQ=255)
                                                                              gtaagttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAATTAc     >  1:977713‑M2/8‑101 (MQ=255)
                                                                                 agttGGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAATTAccgc  >  2:379092‑M2/5‑101 (MQ=255)
                                                                                     |                                                                                                
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAGCATCACCCGATTTTTGAGAGCCAGCGCAACATGTTCAGAAAGTTCACGTGTTCCAAAGGTCGCATAAGGCGCGCAAGGAATAGAATTACCGC  >  94/1‑97

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.