| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 222 | 1 = | 0 (0.000) | 76 (1.140) | 58/200 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 97 | 2 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAAT > 97/1‑102 | gtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGtt > 1:21616‑M2/99‑101 (MQ=255) tgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTg < 2:157901‑M2/4‑1 (MQ=255) attcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGAt > 2:686991‑M2/96‑101 (MQ=255) attcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGAt < 1:1402865‑M2/6‑1 (MQ=255) attcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGAt > 2:370781‑M2/96‑101 (MQ=255) ttcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATa < 2:691679‑M2/7‑1 (MQ=255) ttcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATa > 1:540187‑M2/95‑101 (MQ=255) cgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGaaa > 2:1402339‑M2/91‑101 (MQ=255) acttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAata > 1:1487266‑M2/89‑101 (MQ=255) aaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGcc < 2:239215‑M2/18‑1 (MQ=255) aaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGcc > 2:916019‑M2/84‑101 (MQ=255) aggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCt > 2:49278‑M2/83‑101 (MQ=255) ggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTg < 2:1510289‑M2/20‑1 (MQ=255) gcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGCTGATAGAAATATCGCCTgg < 2:1264364‑M2/21‑1 (MQ=255) tttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCtt < 1:1187480‑M2/26‑1 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTg > 1:769184‑M2/73‑101 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTg > 1:427895‑M2/73‑101 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTg > 1:802940‑M2/73‑101 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTg > 2:1323014‑M2/73‑101 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTg > 1:1614000‑M2/73‑101 (MQ=255) aagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTcc > 1:70283‑M2/70‑101 (MQ=255) gggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCAt < 2:1296015‑M2/34‑1 (MQ=255) gggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCAt > 2:1014242‑M2/68‑101 (MQ=255) gtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCt < 1:1024198‑M2/36‑1 (MQ=255) gtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCt < 2:326464‑M2/36‑1 (MQ=255) gtattttggctttgacatattaggggctatcccatttcagcgtccaacaaaataggtgcagaacaGTTGACAGAAATAGCGCCGGGGCATTTTGTACATCt > 2:1269747‑M2/66‑101 (MQ=255) tattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTg > 1:1254681‑M2/65‑101 (MQ=255) attttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTgg < 1:171002‑M2/38‑1 (MQ=255) tttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTcgc < 1:1402345‑M2/46‑1 (MQ=255) tgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGa > 1:544213‑M2/54‑101 (MQ=255) tgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGa > 2:1052986‑M2/54‑101 (MQ=255) acatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAt < 1:968341‑M2/50‑1 (MQ=255) acatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAt < 1:649360‑M2/50‑1 (MQ=255) acatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAt < 2:265811‑M2/50‑1 (MQ=255) acatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAt < 1:965172‑M2/50‑1 (MQ=255) atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGc > 1:102590‑M2/50‑101 (MQ=255) atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGc > 2:1622524‑M2/50‑101 (MQ=255) atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGc > 2:775459‑M2/50‑101 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCt > 1:1026502‑M2/49‑101 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCtt > 2:1035627‑M2/48‑101 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTa < 1:370781‑M2/55‑1 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTa < 1:1269915‑M2/55‑1 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacagGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAAc > 1:811464‑M2/45‑101 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACg < 2:975607‑M2/58‑1 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACg > 2:856663‑M2/44‑101 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACg < 1:360589‑M2/58‑1 (MQ=255) ggctattccatttcatcgtcgaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGcc < 1:1374933‑M2/60‑1 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGcc > 2:1410103‑M2/42‑101 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAg > 2:1247453‑M2/40‑101 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAg < 1:1164423‑M2/62‑1 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAg > 1:160024‑M2/40‑101 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGa > 2:1118977‑M2/39‑101 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGAc > 1:1106619‑M2/38‑101 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAg > 2:1155600‑M2/36‑101 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGc < 1:1097893‑M2/67‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCt < 2:823356‑M2/69‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCt < 2:66131‑M2/69‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCt > 1:1537459‑M2/33‑101 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCAAGACAGCCt > 2:1644577‑M2/33‑101 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTc < 1:1438390‑M2/70‑1 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTc > 1:232337‑M2/32‑101 (MQ=255) tcgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCa < 1:1035632‑M2/75‑1 (MQ=255) cgtccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCAc > 2:115090‑M2/26‑101 (MQ=255) tccaacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCAccc < 1:1293162‑M2/78‑1 (MQ=255) caacaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGa > 2:220974‑M2/22‑101 (MQ=255) acaaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACg < 2:317719‑M2/82‑1 (MQ=255) caaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGc < 1:1622530‑M2/83‑1 (MQ=255) aaaatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGcc > 2:133734‑M2/18‑101 (MQ=255) aatgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCAt < 2:540182‑M2/86‑1 (MQ=255) atgggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCAtt > 2:1005682‑M2/15‑101 (MQ=255) ggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCta > 1:1141745‑M2/12‑101 (MQ=255) ggtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCta < 2:1266378‑M2/90‑1 (MQ=255) gtgcagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCtat < 1:1076662‑M2/91‑1 (MQ=255) cagtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATAcc > 2:4481‑M2/8‑101 (MQ=255) agtacaGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCt < 1:1277006‑M2/95‑1 (MQ=255) aGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATaa > 1:1459790‑M2/2‑101 (MQ=255) gTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAAt < 2:1416883/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAAT > 97/1‑102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |