New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 222 | 1 = | 0 (0.000) | 88 (1.350) | 66/196 | 0.0 | 100% | intergenic (–/–) | –/– | –/– |
? | 81 | = 9913 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TCGCATTGAAGAACAGAACGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGATGGGACGTCCGCAAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGC > 81/9813‑10011 | tCGCATTGAAGAACAGAACGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCatga < 1:690894/101‑1 (MQ=255) cATTGAAGAACAGAACGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgt < 2:161941‑M2/101‑4 (MQ=255) aTTGAAGAACAGAACGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgta < 2:183045‑M2/101‑5 (MQ=255) aTTGAAGAACAGAACGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgta < 1:193896‑M2/101‑5 (MQ=255) ttGAAGAACAGAACGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtac < 2:913067‑M2/101‑6 (MQ=255) tGAAGAACAGAACGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtact > 2:932819‑M2/1‑95 (MQ=255) aagaaCAGAACGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgc < 2:1635127‑M2/101‑9 (MQ=255) agaacagaacGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgca < 1:1581888‑M2/101‑10 (MQ=255) cagcacGGCGAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcaccca > 1:1132756‑M2/1‑88 (MQ=255) cagaacGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcaccca > 1:1522889‑M2/1‑88 (MQ=255) agaacGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcccccat > 1:1115512‑M2/1‑87 (MQ=255) gaacGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccatt < 2:1210963‑M2/101‑16 (MQ=255) aacGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattt > 1:1676163‑M2/1‑85 (MQ=255) ggCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgt < 1:1601938‑M2/101‑20 (MQ=255) gCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgtt > 2:1409108‑M2/1‑81 (MQ=255) ccAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttg > 1:457850‑M2/1‑80 (MQ=255) ccAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttg > 1:1159540‑M2/1‑80 (MQ=255) cAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttgg > 1:1545681‑M2/1‑79 (MQ=255) cAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatg < 2:1369559‑M2/101‑29 (MQ=255) cAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatg < 1:820789‑M2/101‑29 (MQ=255) aGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatga < 2:873333‑M2/101‑30 (MQ=255) ggAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaa < 2:957865‑M2/101‑31 (MQ=255) aaTATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaat > 1:1635133‑M2/1‑69 (MQ=255) tatGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatgg > 2:1617788‑M2/1‑67 (MQ=255) atGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatgga > 1:1594536‑M2/1‑66 (MQ=255) atGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatgga < 2:781442‑M2/101‑36 (MQ=255) gACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaat < 1:1662824‑M2/101‑38 (MQ=255) aCATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaata > 2:602030‑M2/1‑63 (MQ=255) aTCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagc < 1:221691‑M2/101‑41 (MQ=255) aTCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagc < 2:622428‑M2/101‑41 (MQ=255) aTCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagc < 2:685505‑M2/101‑41 (MQ=255) aTCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagc < 2:838825‑M2/101‑41 (MQ=255) aTCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagc < 2:730402‑M2/101‑41 (MQ=255) aTCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagc < 1:1475364‑M2/101‑41 (MQ=255) cACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:1236365‑M2/101‑46 (MQ=255) aCCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgacgaaatggaatagcccctaa < 2:1652324‑M2/101‑47 (MQ=255) gCCTCGATGCCATACCTTACTCGCCCAGGGCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:1230132‑M2/1‑52 (MQ=255) gCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:183045‑M2/1‑52 (MQ=255) gCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat > 1:1402134‑M2/1‑52 (MQ=255) ccTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg < 2:786538‑M2/101‑51 (MQ=255) cTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgt < 1:1243951‑M2/101‑52 (MQ=255) tCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtc > 1:635817‑M2/1‑49 (MQ=255) cGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca < 2:1284843‑M2/101‑54 (MQ=255) cGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca > 1:313559‑M2/1‑48 (MQ=255) aTGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa < 2:502293‑M2/101‑56 (MQ=255) aTGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa < 2:207846‑M2/101‑56 (MQ=255) tGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaag < 2:1460480‑M2/101‑57 (MQ=255) tGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaag > 1:387310‑M2/1‑45 (MQ=255) aTACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaa < 2:407371‑M2/101‑61 (MQ=255) aTACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaa < 2:1162755‑M2/101‑61 (MQ=255) aTACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaa < 2:1070148‑M2/101‑61 (MQ=255) aCCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa > 2:1220039‑M2/1‑39 (MQ=255) ttACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac > 2:1174437‑M2/1‑36 (MQ=255) aCTCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc < 1:1095094‑M2/101‑68 (MQ=255) tCGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt < 1:269003‑M2/101‑70 (MQ=255) cGCCCAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttt > 2:1319320‑M2/1‑31 (MQ=255) cccAGGCCAGGTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg > 1:622433‑M2/1‑29 (MQ=255) ccaggccaggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga < 2:223273‑M2/101‑74 (MQ=255) ccaggccaggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga > 2:1581882‑M2/1‑28 (MQ=255) caggccaggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccattttgaa < 1:1117387‑M2/101‑75 (MQ=255) aggccaggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa < 1:1195729‑M2/101‑76 (MQ=255) aggccaggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa < 2:1597692‑M2/101‑76 (MQ=255) ggccaggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa < 2:957688‑M2/101‑77 (MQ=255) ggccaggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa < 1:1586780‑M2/101‑77 (MQ=255) gccaggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaag > 1:1162760‑M2/1‑24 (MQ=255) caggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcg > 1:1504909‑M2/1‑22 (MQ=255) aggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgc < 2:1549509‑M2/101‑81 (MQ=255) aggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgc < 1:280579‑M2/101‑81 (MQ=255) aggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgc > 2:820784‑M2/1‑21 (MQ=255) ggTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcc < 1:938066‑M2/101‑82 (MQ=255) gTTCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcct < 2:819813‑M2/101‑83 (MQ=255) ttCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt < 2:734028‑M2/101‑84 (MQ=255) ttCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt > 2:1231800‑M2/1‑18 (MQ=255) ttCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt > 1:668808‑M2/1‑18 (MQ=255) tCGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatccccttttgaaaagcgccttg > 1:1246973‑M2/1‑17 (MQ=255) cGTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttga < 1:498435‑M2/101‑86 (MQ=255) gTTATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaa > 1:620467‑M2/1‑15 (MQ=255) ttATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag < 1:922237‑M2/101‑88 (MQ=255) ttATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag > 2:1583038‑M2/1‑14 (MQ=255) ttATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag > 1:47799‑M2/1‑14 (MQ=255) ttATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag < 2:1164160‑M2/101‑88 (MQ=255) ttATAAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag < 2:883733‑M2/101‑88 (MQ=255) ataAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc < 1:1237755‑M2/101‑90 (MQ=255) taAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcg > 1:1284848‑M2/1‑11 (MQ=255) taAAGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcg < 1:498296‑M2/101‑91 (MQ=255) aaGTCATGAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtg > 1:162874‑M2/1‑9 (MQ=255) tgatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcac > 2:1596462‑M2/1‑3 (MQ=255) tgatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcac < 2:1242776‑M2/101‑99 (MQ=255) tgatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcac > 2:193896‑M2/1‑3 (MQ=255) | TCGCATTGAAGAACAGAACGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTTACTCGCCCAGGCCAGGTTCGTTATAAAGTCATGATGGGACGTCCGCAAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGGATCGCTAACGGTTGGTCGCTATATGGC > 81/9813‑10011 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |