| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 222 | 1 = | 0 (0.000) | 63 (1.290) +GAGGTAAGCCGACGATTTCAGCGGGAC |
40/146 | 0.1 | 97.7% | intergenic (–/–) | –/– | –/– |
| ? | 76 | = 21557 | 4 (0.060) | intergenic (–/–) | –/– | –/– | |||||
TTAACAGTAACAACACAACCAGTATGATGACGAACTTCATCATAACCCTTTCCTTATACAAGGCCCCTTCTTCGGGAGGGGCTTTCCCGTTTCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 76/21462‑21559 | ttAACAGTAACAACACAACCAGTATGATGACGAACTTCATCATAACCCTTTCCTTATACAAGGCCCCTTCTTCGGGAGGGGCTTTCCCGTTTCAGcccctt < 1:190119/101‑4 (MQ=255) aaCAGTAACAACACAACCAGTATGATGACGAACTTCATCATAACCCTTTCCTTATACAAGGCCCCTTCTTCGGGAGGGGCTTTCCCGTTTCAGccccttgc > 1:686808/1‑96 (MQ=255) gTAACAACACAACCAGTATGATGACGAACTTCATCATAACCCTTTCCTTATACAAGGCCCCTTCTTCGGGAGGGGCTTTCCCGTTTCAGccccttgctgcc > 1:10467/1‑92 (MQ=255) tAACAACACAACCAGTATGATGACGAACTTCATCATAACCCTTTCCTTATACAAGGCCCCTTCTTCGGGAGGGGCTTTCCCGTTTCAGccccttgctgccc < 1:834048/101‑11 (MQ=255) ccacgatgatgatccaCTTCATCATGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggctta > 1:292403‑M2/6‑78 (MQ=255) ccacgatgatgagtatCTTCATCATGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttc < 1:1666818‑M2/96‑24 (MQ=255) ccacgatgatgagtatCTTCATCATGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggctta > 1:1284430‑M2/6‑78 (MQ=255) cacgatgatgatccACTTCATCATGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttac < 1:24991‑M2/97‑25 (MQ=255) cacgatgatgagtaTCTTCATCATGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttac > 2:684277‑M2/5‑77 (MQ=255) cacgatgatgagtaGCTTCATCATGACCCTTTCCTTATTTAAGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcttcggcttac > 1:946408‑M2/5‑77 (MQ=255) gatgatgaTCCACTTCATCATGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctc < 1:529865‑M2/100‑28 (MQ=255) atgatgAGTATCTTCATCATGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctct < 1:1580890‑M2/101‑29 (MQ=255) atgatgAGTAGCTTCATCATGACCCTTTCCTTATTTAAGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcttcggcttacctcc < 2:172066‑M2/101‑29 (MQ=255) tgatgaTCCACTTCATCATGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctcct < 2:1605876‑M2/101‑30 (MQ=255) gatgaGTAGCTTCATCATGACCCTTTCCTTATTTAAGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcttcggcttacctcctt < 2:1405924‑M2/101‑31 (MQ=255) atgagtatcttcatcatGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaattgtcggcttacctctgta < 2:498949‑M2/93‑32 (MQ=255) tgagtatcttcatcaTGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtac > 2:652080‑M2/8‑69 (MQ=255) agtatcttcatCATGACCCTTGCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactg < 2:1713100‑M2/96‑35 (MQ=255) tatcttcATCATGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgca < 1:346112‑M2/98‑37 (MQ=255) tatcttcATCATGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgca < 1:847502‑M2/98‑37 (MQ=255) atcttCATCATGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcac < 1:139896‑M2/99‑38 (MQ=255) catcatGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccatt > 1:659568‑M2/1‑59 (MQ=255) catGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttg > 2:1248336‑M2/1‑56 (MQ=255) atGACCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgt < 2:1580309‑M2/101‑47 (MQ=255) tgaccCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgtt > 2:1086083‑M2/3‑54 (MQ=255) tgaccCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgtt > 2:1652922‑M2/3‑54 (MQ=255) tgaccCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgtt < 2:1471531‑M2/99‑48 (MQ=255) gacCCTTTCCTTATTTATGGCCCCTTCCTCGGGGGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttg < 2:1720266‑M2/100‑49 (MQ=255) aCCCTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttgg < 2:850908‑M2/101‑50 (MQ=255) cccTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttgga < 1:329850‑M2/101‑51 (MQ=255) cccTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttgga < 2:784123‑M2/101‑51 (MQ=255) cccTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttgga > 2:876815‑M2/1‑51 (MQ=255) ccTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggac < 1:1526846‑M2/101‑52 (MQ=255) ccTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggac > 1:1594825‑M2/1‑50 (MQ=255) ccTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggac < 1:970003‑M2/101‑52 (MQ=255) cTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttccctctgtactgcacccattttgttggacg > 1:1605882‑M2/1‑49 (MQ=255) cTTTCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacg < 1:597339‑M2/101‑53 (MQ=255) tttCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacga < 2:862067‑M2/101‑54 (MQ=255) ttCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgat > 2:929375‑M2/1‑47 (MQ=255) tCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatg > 1:356805‑M2/1‑46 (MQ=255) tCCTTATTTATGGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggctcacctctgtactgcacccattttgttggacgatg > 1:777913‑M2/1‑46 (MQ=255) ttatttatggccccttccTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaa < 2:1078956‑M2/93‑59 (MQ=255) tatttatggccccttcCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaat > 2:1257467‑M2/8‑42 (MQ=255) atttatggccccttCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatg > 2:1642514‑M2/7‑41 (MQ=255) atttatggccccttCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatg < 2:195018‑M2/95‑61 (MQ=255) tttatggcccctTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatgg < 2:1717021‑M2/96‑62 (MQ=255) ntggccCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaat < 1:373776‑M2/99‑65 (MQ=255) atggccCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaat > 1:1224312‑M2/3‑37 (MQ=255) atggccCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaat > 1:1673798‑M2/3‑37 (MQ=255) ggCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatag < 1:876847‑M2/101‑67 (MQ=255) ggCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatag < 2:1089572‑M2/101‑67 (MQ=255) cccTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagccc > 1:1580315‑M2/1‑32 (MQ=255) ccTTCCTCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccc > 1:670435‑M2/1‑31 (MQ=255) cttcctCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:61235‑M2/101‑72 (MQ=255) cttcctCGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccct > 1:1097645‑M2/1‑30 (MQ=255) cctcggGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 2:1557106‑M2/3‑27 (MQ=255) ctcgGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:1631161‑M2/2‑26 (MQ=255) tcGGGAGGGGCTTTCCCNNNTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatan > 2:373776‑M2/1‑25 (MQ=255) tcGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 2:671365‑M2/101‑77 (MQ=255) tcGGGAGGGGCTTTCCCGTTTCAGAgtcccgctgaaatcgtcggcttacctctgtactgctcccattttgttggacgatgaaatggaatagcccctaatat > 1:169248‑M2/1‑25 (MQ=255) cGGGAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatg > 2:615120‑M2/1‑24 (MQ=255) gggAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgt > 2:720738‑M2/1‑23 (MQ=255) gAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca > 2:674419‑M2/1‑21 (MQ=255) gAGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca > 2:1345794‑M2/1‑21 (MQ=255) aGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa > 2:1580065‑M2/1‑20 (MQ=255) aGGGGCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa < 1:1235456‑M2/101‑82 (MQ=255) ggggCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa > 2:1608501‑M2/1‑19 (MQ=255) gggCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaag > 1:1536744‑M2/1‑18 (MQ=255) gggCTTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaag < 2:1146829‑M2/101‑84 (MQ=255) gCCTTCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc > 1:1011336‑M2/1‑16 (MQ=255) tttCCCGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaa < 2:1221049‑M2/101‑88 (MQ=255) cccGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat > 2:1233774‑M2/1‑11 (MQ=255) cccGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat > 1:1197888‑M2/1‑11 (MQ=255) cGTTTCAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac < 2:128893‑M2/101‑93 (MQ=255) cAGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttt < 2:1568679‑M2/101‑98 (MQ=255) aGCgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt > 1:1568685‑M2/1‑3 (MQ=255) cgtcccgctgaaatcgtcggcttacctctgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga < 2:1418066‑M2/101‑101 (MQ=255) | TTAACAGTAACAACACAACCAGTATGATGACGAACTTCATCATAACCCTTTCCTTATACAAGGCCCCTTCTTCGGGAGGGGCTTTCCCGTTTCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 76/21462‑21559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |