New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 222 1 =0 (0.000)78 (1.170) 60/200 0.2 100% intergenic (–/–) –/– –/–
?61 = 24668 0 (0.000)intergenic (–/–) –/– –/–

TGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  61/24569‑24668
                                                                                                   |                                                                                                   
tgctgctgcAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACt                                                                                                    <  1:1436497‑M2/101‑2 (MQ=255)
   tgctgcAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgta                                                                                                 <  1:1632056‑M2/101‑5 (MQ=255)
            gTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcaccca                                                                                        <  2:722622‑M2/101‑14 (MQ=255)
             tAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccat                                                                                       >  1:871803‑M2/1‑87 (MQ=255)
               aTGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattt                                                                                     <  1:614612‑M2/101‑17 (MQ=255)
               aTGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattt                                                                                     <  1:1254409‑M2/101‑17 (MQ=255)
                 gcgcTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttg                                                                                   >  2:106122‑M2/1‑83 (MQ=255)
                  cgcTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgt                                                                                  <  2:1213234‑M2/101‑20 (MQ=255)
                    cTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttg                                                                                <  2:1439284‑M2/101‑22 (MQ=255)
                     tGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttgg                                                                               >  2:955274‑M2/1‑79 (MQ=255)
                     tGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttgg                                                                               >  2:1390082‑M2/1‑79 (MQ=255)
                     tGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttgg                                                                               <  2:1705214‑M2/101‑23 (MQ=255)
                       cGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggac                                                                             >  2:64831‑M2/1‑77 (MQ=255)
                          gCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgat                                                                          >  2:1251219‑M2/1‑74 (MQ=255)
                            aCCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatga                                                                        >  1:1480271‑M2/1‑72 (MQ=255)
                              cAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaa                                                                      >  1:1642454‑M2/1‑70 (MQ=255)
                               aGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaat                                                                     >  1:96828‑M2/1‑69 (MQ=255)
                               aGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaat                                                                     <  1:178824‑M2/101‑33 (MQ=255)
                               aGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaat                                                                     >  1:297555‑M2/1‑69 (MQ=255)
                                gATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatg                                                                    <  2:710219‑M2/101‑34 (MQ=255)
                                gATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatg                                                                    <  1:1539348‑M2/101‑34 (MQ=255)
                                   cAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaa                                                                 <  1:174370‑M2/101‑37 (MQ=255)
                                     aTTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaata                                                               >  1:1664288‑M2/1‑63 (MQ=255)
                                     aTTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaata                                                               <  2:234589‑M2/101‑39 (MQ=255)
                                     aTTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaata                                                               >  2:754360‑M2/1‑63 (MQ=255)
                                           aaTCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccct                                                         >  1:1229973‑M2/1‑57 (MQ=255)
                                              cccGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaat                                                      >  2:528736‑M2/1‑54 (MQ=255)
                                               ccGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaata                                                     >  2:1136179‑M2/1‑53 (MQ=255)
                                                cGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat                                                    >  2:45024‑M2/1‑52 (MQ=255)
                                                    aaaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca                                                <  1:1152054‑M2/101‑54 (MQ=255)
                                                    aaaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca                                                <  2:1582682‑M2/101‑54 (MQ=255)
                                                     aaCAGGGTTATCGAACTGGGTCCTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa                                               >  2:555300‑M2/1‑47 (MQ=255)
                                                     aaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa                                               >  1:1347596‑M2/1‑47 (MQ=255)
                                                     aaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaa                                               <  1:183581‑M2/101‑55 (MQ=255)
                                                      aCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa                                              >  1:424263‑M2/1‑46 (MQ=255)
                                                      aCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGACAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaa                                              >  1:547065‑M2/1‑46 (MQ=255)
                                                        aGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagc                                            <  1:684766‑M2/101‑58 (MQ=255)
                                                          ggTTATCGAACTGGGTGCTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcca                                          >  2:216436‑M2/1‑42 (MQ=255)
                                                            ttATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaa                                        <  1:1467984‑M2/101‑62 (MQ=255)
                                                             tATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa                                       >  1:343651‑M2/1‑39 (MQ=255)
                                                             tAGCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa                                       >  1:710224‑M2/1‑39 (MQ=255)
                                                              aTCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat                                      <  2:248899‑M2/101‑64 (MQ=255)
                                                              aTCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat                                      >  1:540252‑M2/1‑38 (MQ=255)
                                                              aTCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaaa                                      <  2:1298445‑M2/101‑64 (MQ=255)
                                                                cGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac                                    <  1:77300‑M2/101‑66 (MQ=255)
                                                                cGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatac                                    >  1:93045‑M2/1‑36 (MQ=255)
                                                                  aaCTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc                                  <  1:1459673‑M2/101‑68 (MQ=255)
                                                                  aaCTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc                                  >  2:604499‑M2/1‑34 (MQ=255)
                                                                  aaCTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc                                  >  2:1436491‑M2/1‑34 (MQ=255)
                                                                    cTGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt                                <  1:139289‑M2/101‑70 (MQ=255)
                                                                     tGGGTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaacccaaaatacccgtt                               <  2:495319‑M2/101‑71 (MQ=255)
                                                                       ggTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg                             <  1:323808‑M2/101‑73 (MQ=255)
                                                                        gTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga                            <  2:502227‑M2/101‑74 (MQ=255)
                                                                        gTACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga                            >  2:673634‑M2/1‑28 (MQ=255)
                                                                         tACTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa                           <  2:76320‑M2/101‑75 (MQ=255)
                                                                          aCTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa                          >  1:430587‑M2/1‑26 (MQ=255)
                                                                          aCTCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa                          <  1:344199‑M2/101‑76 (MQ=255)
                                                                            tCAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaag                        >  1:410154‑M2/1‑24 (MQ=255)
                                                                             cAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagc                       <  2:686427‑M2/101‑79 (MQ=255)
                                                                             cAGGTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagc                       <  2:611342‑M2/101‑79 (MQ=255)
                                                                                gTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcc                    <  1:175558‑M2/101‑82 (MQ=255)
                                                                                gTCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcc                    <  2:932040‑M2/101‑82 (MQ=255)
                                                                                 tCGAAATCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcct                   >  1:693104‑M2/1‑19 (MQ=255)
                                                                                  cGAAATCTAACGCCAGAGtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt                  >  1:585342‑M2/1‑18 (MQ=255)
                                                                                    aaaTCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttga                <  2:331726‑M2/101‑86 (MQ=255)
                                                                                    aaaTCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttga                <  1:1517692‑M2/101‑86 (MQ=255)
                                                                                     aaTCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaa               <  2:1298690‑M2/101‑87 (MQ=255)
                                                                                     aaTCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaa               >  2:1631908‑M2/1‑15 (MQ=255)
                                                                                      aTCTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaag              >  2:1254404‑M2/1‑14 (MQ=255)
                                                                                        cTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc            <  2:1477458‑M2/101‑90 (MQ=255)
                                                                                        cTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc            >  2:631330‑M2/1‑12 (MQ=255)
                                                                                        cTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc            <  2:864688‑M2/101‑90 (MQ=255)
                                                                                        cTAACGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc            <  1:826589‑M2/101‑90 (MQ=255)
                                                                                           aCGCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtg         >  1:123446‑M2/1‑9 (MQ=255)
                                                                                             gCCAGACtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa       <  1:511106‑M2/101‑95 (MQ=255)
                                                                                                 tactgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcac   <  1:163869‑M2/100‑99 (MQ=255)
                                                                                                  aCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcact  >  2:583860‑M2/1‑2 (MQ=255)
                                                                                                  aCtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcact  >  2:171002‑M2/1‑2 (MQ=255)
                                                                                                   |                                                                                                   
TGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  61/24569‑24668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.