New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 205 | = 4123 | 0 (0.000) | 54 (0.840) +TGGA |
45/192 | 0.3 | 100% | intergenic (–/–) | –/– | –/– |
? | 33 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTAGAAGA > 33/1‑99 | ccctgactgtggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAg > 1:395926‑M2/100‑101 (MQ=255) cctgactgtggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAgg > 2:1195879‑M2/99‑101 (MQ=255) tgactgtggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGgcg > 2:1715552‑M2/97‑101 (MQ=255) tgtggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGa > 1:1422655‑M2/93‑101 (MQ=255) gtggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGaa < 1:1093977‑M2/10‑1 (MQ=255) ggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACa < 2:293015‑M2/12‑1 (MQ=255) gtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACAt > 2:978865‑M2/89‑101 (MQ=255) gtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACAt < 1:691335‑M2/13‑1 (MQ=255) tgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATc < 2:41167‑M2/14‑1 (MQ=255) gcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATcc > 2:1047648‑M2/87‑101 (MQ=255) gggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATg < 2:466775‑M2/23‑1 (MQ=255) cgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATgaga > 2:1706304‑M2/76‑101 (MQ=255) acgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAAt < 1:755343‑M2/28‑1 (MQ=255) acgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAAt < 2:1672034‑M2/28‑1 (MQ=255) caacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCt < 1:991570‑M2/31‑1 (MQ=255) aacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTg > 1:742961‑M2/70‑101 (MQ=255) taccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAg < 1:807988‑M2/36‑1 (MQ=255) taccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAg < 1:1687308‑M2/36‑1 (MQ=255) aaccaggaaacattggatgaaaagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACAGCCGCCCAATGAGAATGCTGGCAg < 2:1243788‑M2/36‑1 (MQ=255) ccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCg > 1:647193‑M2/64‑101 (MQ=255) ggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATc < 1:855804‑M2/41‑1 (MQ=255) gaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaagggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATcc < 2:1350000‑M2/42‑1 (MQ=255) aaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCg < 2:1196832‑M2/43‑1 (MQ=255) cattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCAt < 1:1715558‑M2/46‑1 (MQ=255) attcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATc > 1:243474‑M2/55‑101 (MQ=255) cgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATcgcg > 1:302887‑M2/52‑101 (MQ=255) tgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGAtt < 2:424690‑M2/53‑1 (MQ=255) tgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGAtt > 1:218297‑M2/49‑101 (MQ=255) agagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCa < 2:980380‑M2/56‑1 (MQ=255) gagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAg < 1:1165052‑M2/57‑1 (MQ=255) gagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAg < 1:5645‑M2/57‑1 (MQ=255) agagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGt > 1:800421‑M2/44‑101 (MQ=255) gtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGtgat > 2:329796‑M2/41‑101 (MQ=255) gtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGtgat > 2:1089212‑M2/41‑101 (MQ=255) gtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGtgat < 1:177832‑M2/61‑1 (MQ=255) ggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGaaa > 1:1540807‑M2/37‑101 (MQ=255) ggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGaaa > 2:1241317‑M2/37‑101 (MQ=255) gttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATggaat < 2:1048927‑M2/66‑2 (MQ=255) ttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACt < 2:740447‑M2/67‑1 (MQ=255) tgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTg < 2:311968‑M2/68‑1 (MQ=255) tgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTg < 1:666676‑M2/68‑1 (MQ=255) gaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTgg < 1:243544‑M2/69‑1 (MQ=255) aagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGc < 2:1239270‑M2/70‑1 (MQ=255) ctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGaa > 2:397023‑M2/29‑101 (MQ=255) taaagaaaatgatccggatgaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAg < 2:1629838‑M2/74‑1 (MQ=255) aggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTc > 2:628253‑M2/26‑101 (MQ=255) atgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGAt > 1:1525215‑M2/20‑101 (MQ=255) tccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCg > 1:84894‑M2/16‑101 (MQ=255) aggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATc < 2:647188‑M2/91‑1 (MQ=255) gaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGt > 2:1292360‑M2/9‑101 (MQ=255) aaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTa > 1:716708‑M2/8‑101 (MQ=255) aaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTa < 1:576128‑M2/94‑1 (MQ=255) aatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTag < 1:394812‑M2/95‑1 (MQ=255) aatggaAGGATATGACCATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCAATTGCAGTGATGAAACTGGCAAAGTCGCAGATCCCGTAATCGTag < 2:660173‑M2/95‑1 (MQ=255) tggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaa > 1:512328‑M2/5‑101 (MQ=255) tggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaa > 1:1237042‑M2/5‑101 (MQ=255) ggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaag > 2:1094357‑M2/4‑101 (MQ=255) ggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaag > 2:215133‑M2/4‑101 (MQ=255) ggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaag > 2:775614‑M2/4‑101 (MQ=255) ggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaag > 1:703166‑M2/4‑101 (MQ=255) gaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaaga > 1:1450796‑M2/3‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTAGAAGA > 33/1‑99 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |