New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 205 = 41230 (0.000)54 (0.840)
+TGGA
45/192 0.3 100% intergenic (–/–) –/– –/–
?33 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTAGAAGA  >  33/1‑99
                                                                                                   |                                                                                                  
ccctgactgtggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAg                                                                                                   >  1:395926‑M2/100‑101 (MQ=255)
 cctgactgtggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAgg                                                                                                  >  2:1195879‑M2/99‑101 (MQ=255)
   tgactgtggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGgcg                                                                                                >  2:1715552‑M2/97‑101 (MQ=255)
       tgtggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGa                                                                                            >  1:1422655‑M2/93‑101 (MQ=255)
        gtggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGaa                                                                                           <  1:1093977‑M2/10‑1 (MQ=255)
          ggtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACa                                                                                         <  2:293015‑M2/12‑1 (MQ=255)
           gtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACAt                                                                                        >  2:978865‑M2/89‑101 (MQ=255)
           gtgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACAt                                                                                        <  1:691335‑M2/13‑1 (MQ=255)
            tgcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATc                                                                                       <  2:41167‑M2/14‑1 (MQ=255)
             gcggtgatgggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATcc                                                                                      >  2:1047648‑M2/87‑101 (MQ=255)
                     gggcgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATg                                                                              <  2:466775‑M2/23‑1 (MQ=255)
                        cgacgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATgaga                                                                           >  2:1706304‑M2/76‑101 (MQ=255)
                          acgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAAt                                                                         <  1:755343‑M2/28‑1 (MQ=255)
                          acgcaacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAAt                                                                         <  2:1672034‑M2/28‑1 (MQ=255)
                             caacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCt                                                                      <  1:991570‑M2/31‑1 (MQ=255)
                              aacataccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTg                                                                     >  1:742961‑M2/70‑101 (MQ=255)
                                  taccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAg                                                                 <  1:807988‑M2/36‑1 (MQ=255)
                                  taccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAg                                                                 <  1:1687308‑M2/36‑1 (MQ=255)
                                  aaccaggaaacattggatgaaaagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACAGCCGCCCAATGAGAATGCTGGCAg                                                                 <  2:1243788‑M2/36‑1 (MQ=255)
                                    ccaggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCg                                                               >  1:647193‑M2/64‑101 (MQ=255)
                                       ggaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATc                                                            <  1:855804‑M2/41‑1 (MQ=255)
                                        gaaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaagggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATcc                                                           <  2:1350000‑M2/42‑1 (MQ=255)
                                         aaacattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCg                                                          <  2:1196832‑M2/43‑1 (MQ=255)
                                            cattcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCAt                                                       <  1:1715558‑M2/46‑1 (MQ=255)
                                             attcgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATc                                                      >  1:243474‑M2/55‑101 (MQ=255)
                                                cgatgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATcgcg                                                   >  1:302887‑M2/52‑101 (MQ=255)
                                                   tgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGAtt                                                <  2:424690‑M2/53‑1 (MQ=255)
                                                   tgaagagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGAtt                                                >  1:218297‑M2/49‑101 (MQ=255)
                                                      agagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCa                                             <  2:980380‑M2/56‑1 (MQ=255)
                                                       gagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAg                                            <  1:1165052‑M2/57‑1 (MQ=255)
                                                       gagagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAg                                            <  1:5645‑M2/57‑1 (MQ=255)
                                                        agagtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGt                                           >  1:800421‑M2/44‑101 (MQ=255)
                                                           gtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGtgat                                        >  2:329796‑M2/41‑101 (MQ=255)
                                                           gtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGtgat                                        >  2:1089212‑M2/41‑101 (MQ=255)
                                                           gtcaggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGtgat                                        <  1:177832‑M2/61‑1 (MQ=255)
                                                               ggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGaaa                                    >  1:1540807‑M2/37‑101 (MQ=255)
                                                               ggttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGaaa                                    >  2:1241317‑M2/37‑101 (MQ=255)
                                                                gttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATggaat                                   <  2:1048927‑M2/66‑2 (MQ=255)
                                                                 ttgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACt                                  <  2:740447‑M2/67‑1 (MQ=255)
                                                                  tgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTg                                 <  2:311968‑M2/68‑1 (MQ=255)
                                                                  tgaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTg                                 <  1:666676‑M2/68‑1 (MQ=255)
                                                                   gaagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTgg                                <  1:243544‑M2/69‑1 (MQ=255)
                                                                    aagctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGc                               <  2:1239270‑M2/70‑1 (MQ=255)
                                                                       ctaaggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGaa                            >  2:397023‑M2/29‑101 (MQ=255)
                                                                        taaagaaaatgatccggatgaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAg                           <  2:1629838‑M2/74‑1 (MQ=255)
                                                                          aggaaaatgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTc                         >  2:628253‑M2/26‑101 (MQ=255)
                                                                                atgatccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGAt                   >  1:1525215‑M2/20‑101 (MQ=255)
                                                                                    tccggaggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCg               >  1:84894‑M2/16‑101 (MQ=255)
                                                                                         aggaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATc          <  2:647188‑M2/91‑1 (MQ=255)
                                                                                           gaaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGt        >  2:1292360‑M2/9‑101 (MQ=255)
                                                                                            aaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTa       >  1:716708‑M2/8‑101 (MQ=255)
                                                                                            aaatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTa       <  1:576128‑M2/94‑1 (MQ=255)
                                                                                             aatggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTag      <  1:394812‑M2/95‑1 (MQ=255)
                                                                                             aatggaAGGATATGACCATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCAATTGCAGTGATGAAACTGGCAAAGTCGCAGATCCCGTAATCGTag      <  2:660173‑M2/95‑1 (MQ=255)
                                                                                               tggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaa    >  1:512328‑M2/5‑101 (MQ=255)
                                                                                               tggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaa    >  1:1237042‑M2/5‑101 (MQ=255)
                                                                                                ggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaag   >  2:1094357‑M2/4‑101 (MQ=255)
                                                                                                ggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaag   >  2:215133‑M2/4‑101 (MQ=255)
                                                                                                ggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaag   >  2:775614‑M2/4‑101 (MQ=255)
                                                                                                ggaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaag   >  1:703166‑M2/4‑101 (MQ=255)
                                                                                                 gaAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTagaaga  >  1:1450796‑M2/3‑101 (MQ=255)
                                                                                                   |                                                                                                  
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTAGAAGA  >  33/1‑99

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.