New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 2 | 55659 = | 45 (0.680) | 30 (0.490) | 19/184 | 2.6 | 59.2% | intergenic (–/–) | –/– | –/– |
? | 70 | = 22841 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
AAATCAAGGCCTGGCTGGCATAATCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAGTGAA > 70/22743‑22849 | aaaTCAAGGCCTGGCTGGCATAATCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcg < 2:857035‑M2/101‑3 (MQ=255) aaaTCAAGGCCTGGCTGGCATAATCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcg < 1:1130758‑M2/101‑3 (MQ=255) aaTCAAGGCCTGGCTGGCATAATCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcga < 1:1324324‑M2/101‑4 (MQ=255) tCAAGGCCTGGCTGGCATAATCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagt > 1:1710382‑M2/1‑96 (MQ=255) ggCCTGGCTGGCATAATCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaag < 1:1688102‑M2/101‑10 (MQ=255) aTAATCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagctt < 2:658643‑M2/101‑22 (MQ=255) aTAATCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagctt < 1:1037280‑M2/101‑22 (MQ=255) aTAATCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACCCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagctt > 1:1448454‑M2/1‑80 (MQ=255) tAATCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagctta > 1:329175‑M2/1‑79 (MQ=255) aaTCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttac > 2:119967‑M2/1‑78 (MQ=255) cTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataag < 1:1023753‑M2/101‑29 (MQ=255) cTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataag < 2:459047‑M2/101‑29 (MQ=255) cTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataag < 1:1716825‑M2/101‑29 (MQ=255) cTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataag > 2:784571‑M2/1‑73 (MQ=255) tACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagt < 2:734467‑M2/101‑30 (MQ=255) tccTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgact > 2:1172054‑M2/1‑64 (MQ=255) tccTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgact > 2:1716819‑M2/1‑64 (MQ=255) tccTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgact > 1:983696‑M2/1‑64 (MQ=255) tGCTATGCTTAACAAATTATTCGTAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggg < 2:1119655‑M2/101‑41 (MQ=255) tGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggg < 1:1440051‑M2/101‑41 (MQ=255) tGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggg > 2:110411‑M2/1‑61 (MQ=255) gCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactgggg > 1:1217197‑M2/1‑60 (MQ=255) cTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggt < 2:1134031‑M2/101‑43 (MQ=255) cTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggt < 1:700493‑M2/101‑43 (MQ=255) aTGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggtga < 2:1631632‑M2/101‑45 (MQ=255) aTGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactgggggga < 2:187365‑M2/101‑45 (MQ=255) gCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggtgaac > 1:658648‑M2/1‑55 (MQ=255) cTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggtgaacg < 2:703023‑M2/101‑48 (MQ=255) cTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggtgaacg < 1:507742‑M2/101‑48 (MQ=255) tAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaa < 2:354525‑M2/101‑50 (MQ=255) aCAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatg < 1:1315309‑M2/101‑52 (MQ=255) aaTTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcag < 1:623369‑M2/101‑55 (MQ=255) attattCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagc > 1:459052‑M2/1‑46 (MQ=255) cATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagc > 1:1133346‑M2/1‑40 (MQ=255) tAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAAcgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcac < 1:1093437‑M2/101‑64 (MQ=255) | AAATCAAGGCCTGGCTGGCATAATCCCTACTCCACTCCTGCTATGCTTAACAAATTATTCATAGACTCTAAATAATTCGAGTTGCAGGAAGGCGGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAGTGAA > 70/22743‑22849 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |