New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 197 1 =0 (0.000)66 (1.000) 57/198 0.1 100% intergenic (–/–) –/– –/–
?202 = 4398 0 (0.000)intergenic (–/–) –/– –/–

ATCTGAATGCTCATCATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑A  >  202/4301‑4399
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aTCTGAATGCTCATCATGCCGAAATTTCAAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagc                                                                                                   <  2:1199231‑M2/101‑4 (MQ=255)
 tCTGAATGCTCATCATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagcc                                                                                                  >  2:726560‑M2/1‑97 (MQ=255)
  cTGAATGCTCATCATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCAGTCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccg                                                                                                 >  2:865366‑M2/1‑96 (MQ=255)
   tGAATGCTCATCATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgc                                                                                                <  1:87902‑M2/101‑7 (MQ=255)
      aTGCTCATCATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctac                                                                                             >  2:98124‑M2/1‑92 (MQ=255)
         cTCATCATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccac                                                                                          <  2:131831‑M2/101‑13 (MQ=255)
         cTCATCATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccac                                                                                          <  1:978643‑M2/101‑13 (MQ=255)
          tcatcaTGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCCCCGCAGGCCGTTGCGAAAACGGCagccgctaccacc                                                                                         >  2:473610‑M2/1‑88 (MQ=255)
           catcatGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccg                                                                                        <  2:612742‑M2/101‑15 (MQ=255)
              catGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgctt                                                                                     >  2:271560‑M2/1‑84 (MQ=255)
               atGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttc                                                                                    <  1:369452‑M2/101‑19 (MQ=255)
                  ccGAAATTTCGGGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcaca                                                                                 >  2:1098377‑M2/1‑80 (MQ=255)
                    gAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaac                                                                               >  2:445255‑M2/1‑78 (MQ=255)
                         ttCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaa                                                                          <  1:1450508‑M2/101‑29 (MQ=255)
                           cGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaat                                                                        >  1:1023229‑M2/1‑71 (MQ=255)
                             aGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGTACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattg                                                                      <  2:1591928‑M2/101‑33 (MQ=255)
                             aGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattg                                                                      >  1:1234900‑M2/1‑69 (MQ=255)
                               tttCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcc                                                                    <  1:864279‑M2/101‑35 (MQ=255)
                                ttCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcct                                                                   <  2:452626‑M2/101‑36 (MQ=255)
                                  cTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctcc                                                                 >  2:1306065‑M2/1‑64 (MQ=255)
                                   tttatttaGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccg                                                                <  2:838394‑M2/101‑39 (MQ=255)
                                    ttatttaGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccgg                                                               <  2:111132‑M2/101‑40 (MQ=255)
                                     tatttaGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggt                                                              >  1:160750‑M2/1‑61 (MQ=255)
                                       tttaGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtag                                                            <  1:928566‑M2/101‑43 (MQ=255)
                                       tttaGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtag                                                            >  2:1231939‑M2/1‑59 (MQ=255)
                                       tttaGCCCGGCCATGATGCTGGCTGTGCCTTTGGCACCGCAGGCCGTTGGGAAAACCGCagccgctaccaccgcttcacaaccggaaattgcctccggtag                                                            >  2:900879‑M2/1‑59 (MQ=255)
                                             cTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgat                                                      <  2:1312436‑M2/101‑49 (MQ=255)
                                             cTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgat                                                      <  1:11550‑M2/101‑49 (MQ=255)
                                              tGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatg                                                     <  1:763525‑M2/101‑50 (MQ=255)
                                              tGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatg                                                     <  1:938223‑M2/101‑50 (MQ=255)
                                                 cccTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgatt                                                  <  2:472756‑M2/101‑53 (MQ=255)
                                                  ccTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCaggcgctaccaccgcttcacaaccggaaattgcctccggaagcgcgatgattg                                                 <  2:1277589‑M2/101‑54 (MQ=255)
                                                  ccTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattg                                                 <  1:462372‑M2/101‑54 (MQ=255)
                                                      aTGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttga                                             <  2:1111223‑M2/101‑58 (MQ=255)
                                                          tggctgTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctg                                         >  1:1185875‑M2/1‑40 (MQ=255)
                                                           ggctgTGCCTTTTGCACGGCAGGCCGTTGCGAAATCGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctga                                        >  2:117835‑M2/1‑39 (MQ=255)
                                                             ctgTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaat                                      >  2:925606‑M2/1‑37 (MQ=255)
                                                             ctgTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaat                                      >  1:434435‑M2/1‑37 (MQ=255)
                                                              tgtgCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaata                                     >  1:131831‑M2/1‑36 (MQ=255)
                                                              tgtgCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaata                                     <  1:1049992‑M2/101‑66 (MQ=255)
                                                               gtgCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaatac                                    <  2:1028742‑M2/101‑67 (MQ=255)
                                                               gtgCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaatac                                    <  1:1688500‑M2/101‑67 (MQ=255)
                                                               gtgCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaatac                                    >  1:636935‑M2/1‑35 (MQ=255)
                                                               gtgCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcatccggtagcgcgatgattgttgatctgaatac                                    <  1:564048‑M2/101‑67 (MQ=255)
                                                                 gCCTTTTGCGCCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaatacca                                  >  2:941333‑M2/1‑33 (MQ=255)
                                                                 gCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaatacca                                  <  1:119791‑M2/101‑69 (MQ=255)
                                                                   cTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaac                                <  1:1168595‑M2/101‑71 (MQ=255)
                                                                   cTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaac                                <  1:408162‑M2/101‑71 (MQ=255)
                                                                   cTTTTGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaac                                >  2:524526‑M2/1‑31 (MQ=255)
                                                                     tttGCACCGCAGGCCGTTGCGAAAACGGCagccgctaccacctcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaa                              <  1:108100‑M2/101‑73 (MQ=255)
                                                                        gCACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagt                           >  1:1708626‑M2/1‑26 (MQ=255)
                                                                         cACCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtg                          <  2:460910‑M2/101‑77 (MQ=255)
                                                                          aCCGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtga                         <  1:1146208‑M2/101‑78 (MQ=255)
                                                                           ccGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgat                        >  1:528334‑M2/1‑23 (MQ=255)
                                                                            cGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatc                       <  1:951230‑M2/101‑80 (MQ=255)
                                                                            cGCAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatc                       >  2:564043‑M2/1‑22 (MQ=255)
                                                                              cAGGCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatcta                     >  1:111132‑M2/1‑20 (MQ=255)
                                                                                ggCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatctatt                   >  1:612747‑M2/1‑18 (MQ=255)
                                                                                 gCCGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatctattc                  <  2:1231035‑M2/101‑85 (MQ=255)
                                                                                  ccGTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatctattcg                 >  1:1602550‑M2/1‑16 (MQ=255)
                                                                                    gTTGCGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatctattcgaa               <  2:93856‑M2/101‑88 (MQ=255)
                                                                                        cGAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatctattcgaaccac           <  2:1151658‑M2/101‑92 (MQ=255)
                                                                                         gAAAACGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatctattcgaaccacc          <  1:1371610‑M2/101‑93 (MQ=255)
                                                                                          aaaaCGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatctattcgaaccaccc         >  2:1228141‑M2/1‑8 (MQ=255)
                                                                                            aaCGGCagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatctattcgaaccacccgg       <  1:111884‑M2/101‑96 (MQ=255)
                                                                                                 cagccgctaccaccgcttcacaaccggaaattgcctccggtagcgcgatgattgttgatctgaataccaacaaagtgatctattcgaaccacccggatctg  >  2:709861‑M2/1‑1 (MQ=255)
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ATCTGAATGCTCATCATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑A  >  202/4301‑4399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.