| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 195 | = 5423 | 0 (0.000) | 36 (0.540) | 24/200 | 1.8 | 80.0% | intergenic (–/–) | –/– | –/– |
| ? | 25 | 29389 = | 18 (0.270) | intergenic (–/–) | –/– | –/– | |||||
TATTCGGCAAGGTCTGAACCGTCCCAGCCATCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAA > 25/29291‑29489 | ccgtttgtaagagttaaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTc < 1:1429322‑M2/3‑1 (MQ=255) cgtttgtaagagttaaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTcc > 2:1105954‑M2/98‑101 (MQ=255) tgtaagagttaaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTc > 2:251878‑M2/94‑101 (MQ=255) tgtaagagttaaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTc > 1:1561250‑M2/94‑101 (MQ=255) gtaagagttaaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCg > 2:916272‑M2/93‑101 (MQ=255) gtaagagttaaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCg < 2:392906‑M2/9‑1 (MQ=255) aagagttaaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGcc > 2:1494558‑M2/91‑101 (MQ=255) agttaaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCct > 2:1094324‑M2/88‑101 (MQ=255) agttaaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCct < 1:1262888‑M2/14‑1 (MQ=255) gttaaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCctc > 1:273364‑M2/87‑101 (MQ=255) gttaaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCctc > 1:181874‑M2/87‑101 (MQ=255) tGAACCGTCCCAGCCATCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTg < 1:1477405/101‑1 (MQ=255) aaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTgg < 2:290357‑M2/18‑1 (MQ=255) aaccgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTgg < 2:1524187‑M2/18‑1 (MQ=255) aaCCGTCCCAGCCATCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTggg < 1:786806/101‑1 (MQ=255) aCCGTCCCAGCCATCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTgggg > 2:518221/1‑101 (MQ=255) cgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGga > 2:936073‑M2/81‑101 (MQ=255) cgttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGga > 2:34976‑M2/81‑101 (MQ=255) gttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGgag > 2:759569‑M2/80‑101 (MQ=255) gttgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGgag > 1:715571‑M2/80‑101 (MQ=255) cGTCCCAGCCATCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGgag < 2:639444/101‑1 (MQ=255) tgctaagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGagag < 2:1363376‑M2/24‑1 (MQ=255) cAGCCATCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGt > 2:61206/1‑101 (MQ=255) aagggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGtt > 1:950545‑M2/74‑101 (MQ=255) aGCCATCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGtt < 2:603378/101‑1 (MQ=255) gCCATCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTa < 2:902079/101‑1 (MQ=255) agggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTa < 1:459234‑M2/29‑1 (MQ=255) gggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAg < 2:255711‑M2/30‑1 (MQ=255) ccATCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAg < 2:400670/101‑1 (MQ=255) ggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg < 1:933247‑M2/31‑1 (MQ=255) ggaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg < 1:1481130‑M2/31‑1 (MQ=255) cATCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg < 2:841992/101‑1 (MQ=255) gaatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg > 1:1145624‑M2/70‑101 (MQ=255) aTCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg < 2:1426420/101‑1 (MQ=255) aatgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaacacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGt > 2:481535‑M2/69‑101 (MQ=255) atgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTg > 2:1287465‑M2/68‑101 (MQ=255) atgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTg > 2:1223827‑M2/68‑101 (MQ=255) atgataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTg > 1:1173693‑M2/68‑101 (MQ=255) gataacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg < 1:153788‑M2/36‑1 (MQ=255) cATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAgg > 2:1434355/1‑101 (MQ=255) cATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAgg < 1:515890/101‑1 (MQ=255) taacgatgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAggg < 2:1084764‑M2/38‑1 (MQ=255) aaaGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGaa > 2:1147928/1‑101 (MQ=255) aGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGaaaa > 1:15079/1‑101 (MQ=255) tgcagtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGgtaaaa > 2:1577483‑M2/58‑100 (MQ=255) agtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAggggtaaaacac < 2:1145619‑M2/47‑5 (MQ=255) gtaaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGATAGGGTGaggggcaaaacacg > 2:1523943‑M2/54‑96 (MQ=255) aaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGtgaggggtaaaacacgcg > 1:1208536‑M2/52‑94 (MQ=255) aaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGtgaggggtaaaacacgcg < 2:812939‑M2/50‑8 (MQ=255) aaaaaataataacgatgaggcgaacgacaaagttaaaaacgactgcggacaGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGtgaggggtaaaacacgcg > 1:527380‑M2/52‑94 (MQ=255) cTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccct > 2:444250‑M1/1‑91 (MQ=255) tgtttgttGCTGGGGTAACAATATTTGCACAATACGGTCGCCTCGACCCTCTGGGGAGAGGGTTAGGGGGAGGGGAAAAGcgccccccctgccgcagcctg > 1:1692278‑M1/1‑80 (MQ=255) tgtttgttGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctg > 2:568268‑M1/1‑80 (MQ=255) gcgggggtaaCAATTTTTGCACAATCCGGCCCCCCCGCCCCTCGGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtc < 2:1369635‑M1/98‑30 (MQ=255) gTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacct > 1:623226‑M1/1‑66 (MQ=255) gTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacct > 1:81810‑M1/1‑66 (MQ=255) gTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacct > 1:771524‑M1/1‑66 (MQ=255) aCAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggc > 1:215675‑M1/1‑63 (MQ=255) cAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggca > 2:1182060‑M1/1‑62 (MQ=255) atatTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAAcgccccccctgccgcagcctgctccggtcggccctggcaac > 1:11476‑M1/1‑60 (MQ=255) atTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaacta > 1:1429436‑M1/1‑58 (MQ=255) agcgcgatcGGTCCCCTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCaa > 2:1321808/9‑101 (MQ=38) gcgcgatcGGTCCCCTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCaaa < 1:54513/94‑1 (MQ=255) caATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctac > 1:284578‑M1/1‑51 (MQ=255) aaTACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctact > 2:848077‑M1/1‑50 (MQ=255) atcGGTCCCCTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACg > 1:583416/3‑101 (MQ=255) cGGTCCCCTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGAt < 2:1664733/101‑1 (MQ=255) cGGTCCCCTCCCCCCTCTGGGGGGAGGGTGGGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcaca < 2:1362334‑M1/101‑56 (MQ=255) gTCCCCTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATaa < 2:1096081/101‑1 (MQ=255) | TATTCGGCAAGGTCTGAACCGTCCCAGCCATCGCCATGAAAGGGTTAGGGGCTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAA > 25/29291‑29489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |