| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 194 | = 5424 | 0 (0.000) | 43 (0.770) +AGCGCATCAGGCGATT |
35/168 | 0.5 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 54 | = 28773 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
AATTGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 54/28675‑28773 | aaTTGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaa < 1:432068‑M2/101‑3 (MQ=255)aaTTGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaa > 2:1428699‑M2/1‑99 (MQ=255)aaTTGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaa < 1:1205321‑M2/101‑3 (MQ=255) aTTGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaat < 1:905074‑M2/101‑4 (MQ=255) tGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcg > 1:1019707‑M2/1‑96 (MQ=255) tGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcg > 2:557127‑M2/1‑96 (MQ=255) gCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcc < 1:253637‑M2/101‑8 (MQ=255) gCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcc < 2:384931‑M2/101‑8 (MQ=255) cTATTTGTATGTTGAGGCGCAGTTATGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcct < 2:1497169‑M2/101‑9 (MQ=255) tATTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctg > 2:1324943‑M2/1‑92 (MQ=255) aTTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctga < 2:1166605‑M2/101‑11 (MQ=255) aTTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctga < 1:119006‑M2/101‑11 (MQ=255) tttGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgat > 1:485390‑M2/1‑90 (MQ=255) tttGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgat > 1:579013‑M2/1‑90 (MQ=255) aTGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgct < 1:1184657‑M2/101‑17 (MQ=255) aTGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgct < 1:644889‑M2/101‑17 (MQ=255) tGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgcta < 2:1339751‑M2/101‑18 (MQ=255) ggCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgctta < 1:735894‑M2/101‑24 (MQ=255) gcgcAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttat > 1:1642033‑M2/1‑77 (MQ=255) gcAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatca > 2:1427986‑M2/1‑75 (MQ=255) gcAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatca > 2:1162515‑M2/1‑75 (MQ=255) gcAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatca > 2:1571263‑M2/1‑75 (MQ=255) cGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctac < 1:1447394‑M2/101‑34 (MQ=255) cGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctac > 1:29356‑M2/1‑68 (MQ=255) gACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctaca > 2:97965‑M2/1‑67 (MQ=255) aGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacgg < 1:585731‑M2/101‑38 (MQ=255) tGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagatt < 1:345566‑M2/101‑43 (MQ=255) tGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagatt > 2:545665‑M2/1‑59 (MQ=255) tGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagatt > 1:30800‑M2/1‑59 (MQ=255) gATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattg > 1:996817‑M2/1‑58 (MQ=255) gcgATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatat < 1:1683261‑M2/101‑50 (MQ=255) cgATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatata > 2:666992‑M2/1‑51 (MQ=255) cgATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatata > 1:1196062‑M2/1‑51 (MQ=255) gATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatat < 1:268021‑M2/101‑52 (MQ=255) aTAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatatt < 2:869877‑M2/101‑53 (MQ=255) aTAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatatt < 2:1322509‑M2/101‑53 (MQ=255) gTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatt < 1:805044‑M2/101‑58 (MQ=255) aGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaag < 1:504351‑M2/101‑64 (MQ=255) ttCCCGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattt > 2:205792‑M2/1‑34 (MQ=255) ccGAAGGAAGCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattctgt > 2:12491‑M2/1‑31 (MQ=255) gaaggaagCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtag > 2:1471928‑M2/1‑29 (MQ=255) ggaagCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcc < 1:543210‑M2/101‑76 (MQ=255) aagCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctg > 1:365059‑M2/1‑24 (MQ=255) gCCTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgag < 2:314510‑M2/101‑80 (MQ=255) cTTGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaa < 1:1488145‑M2/101‑82 (MQ=255) cTTGATGATCATAAACGAAAaatcgccggatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaa < 2:87605‑M2/101‑82 (MQ=255) ttGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaag > 2:428053‑M2/1‑19 (MQ=255) ttGATGATCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaag < 1:1099832‑M2/101‑83 (MQ=255) gatgatCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaaggt > 1:1166610‑M2/1‑17 (MQ=255) atgatCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaaggtg < 2:991316‑M2/101‑86 (MQ=255) tgatCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaaggtgt < 1:1601972‑M2/101‑87 (MQ=255) atCATAAACGAAAaatcgcctgttgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaaggtgttc < 2:1512170‑M2/101‑89 (MQ=255) atCATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaaggttttgtaggcctgagaaggggttt < 1:266587‑M2/101‑89 (MQ=255) cATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaaggtgttcat < 1:661123‑M2/101‑91 (MQ=255) cATAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaaggtgttcat > 1:639953‑M2/1‑11 (MQ=255) aTAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaaggtgttcatg < 2:751659‑M2/101‑92 (MQ=255) aTAAACGAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaaggtgttcatg < 2:667326‑M2/101‑92 (MQ=255) gAAAaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaaggtgttcatgccgcat > 1:1395498‑M2/1‑4 (MQ=255) aaaaatcgcctgatgcgctacgcttatcaggcctacacggagattgcaatatattgaatttgcaagattttgtaggcctgagaaggtgttcatgccgcatc > 2:268021‑M2/1‑3 (MQ=255) | AATTGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 54/28675‑28773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |