New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 191 | = 5864 | 0 (0.000) | 55 (0.990) | 43/166 | -0.0 | 100% | intergenic (–/–) | –/– | –/– |
? | 193 | = 2264 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
CGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGAGAGAGGCTGATCACTATGCAAAAACAACTGGAAGGAACCCAGAAGTATATTAATGAGCAGTGCAGATAGAGCTGCCCATA > 193/2165‑2364 | cGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACg > 1:1027046‑M2/1‑100 (MQ=255) ttGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGTATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACggga > 2:1707532‑M2/1‑97 (MQ=255) gCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggatt < 1:1664806‑M2/101‑7 (MQ=255) cacaTCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggatta > 1:1345769‑M2/1‑94 (MQ=255) cacaTCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggatta > 2:882167‑M2/1‑94 (MQ=255) aTCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattattt > 2:1217048‑M2/1‑91 (MQ=255) tCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttc < 1:1460574‑M2/101‑12 (MQ=255) aGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccc < 2:1403504‑M2/101‑16 (MQ=255) cAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctc > 2:613863‑M2/1‑84 (MQ=255) aGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctcc < 2:686820‑M2/101‑19 (MQ=255) gtcagtcaGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaa < 2:100343‑M2/101‑24 (MQ=255) tcagtcagTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaac > 2:506445‑M2/1‑77 (MQ=255) agtcagtGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacga < 2:1285233‑M2/101‑27 (MQ=255) tcagtGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgact > 1:680954‑M2/1‑73 (MQ=255) cagtGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactg < 2:799417‑M2/101‑30 (MQ=255) cagtGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactg < 1:430661‑M2/101‑30 (MQ=255) tGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggta < 1:1540956‑M2/101‑33 (MQ=255) cGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaat > 2:307393‑M2/1‑67 (MQ=255) tGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatga < 1:610197‑M2/101‑37 (MQ=255) aaGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatg > 1:1162688‑M2/1‑63 (MQ=255) aGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgc > 1:406982‑M2/1‑62 (MQ=255) gCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgca > 2:1415077‑M2/1‑61 (MQ=255) ccacccCCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACCCCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcag > 2:1550016‑M2/1‑60 (MQ=255) ccaccaCCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcag > 1:593505‑M2/1‑60 (MQ=255) ccaccaCCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcag > 1:618144‑M2/1‑60 (MQ=255) ccaccaCCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcag > 2:1104366‑M2/1‑60 (MQ=255) ccaccaCCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcag < 1:610354‑M2/101‑42 (MQ=255) caccacCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcagg < 2:211917‑M2/101‑43 (MQ=255) caccacCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcagg < 1:1159189‑M2/101‑43 (MQ=255) accaccGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggc < 1:1177635‑M2/101‑44 (MQ=255) ccGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggagcgactggtaatcatgcaggcccac < 2:1471651‑M2/101‑48 (MQ=255) ccTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaactt > 2:1536452‑M2/1‑51 (MQ=255) tGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgct > 2:461396‑M2/1‑42 (MQ=255) aTAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcatcctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcag < 2:1070922‑M2/101‑63 (MQ=255) aTGCAGCCTCCTCCCGACTGGCAGACACCGCTGATCgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaa > 1:1066944‑M2/1‑36 (MQ=255) aTGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaa < 1:953284‑M2/101‑66 (MQ=255) tGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaat > 2:1177630‑M2/1‑35 (MQ=255) tGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaat > 1:994948‑M2/1‑35 (MQ=255) tGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaat < 2:57965‑M2/101‑67 (MQ=255) ccTCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaacatcac > 2:1378278‑M2/1‑30 (MQ=255) tCCCCCCGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataac > 1:45601‑M2/1‑28 (MQ=255) ccccccGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttggaggtgctcagcaatacataacc > 1:154963‑M2/1‑27 (MQ=255) ccccccGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataacc > 1:32414‑M2/1‑27 (MQ=255) ccccGACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccga < 1:148021‑M2/101‑77 (MQ=255) gACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacag > 2:49039‑M2/1‑21 (MQ=255) gACTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacag < 2:305009‑M2/101‑81 (MQ=255) cTGGCAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtg < 2:502464‑M2/101‑83 (MQ=255) cAGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgttta < 2:956646‑M2/101‑87 (MQ=255) aGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaa < 2:492021‑M2/101‑88 (MQ=255) aGACACCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaa > 2:1651247‑M2/1‑14 (MQ=255) gACACCGCTGAACgggattatttcgccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaa > 2:621284‑M2/1‑13 (MQ=255) cacCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagt < 2:1531127‑M2/101‑91 (MQ=255) acCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagta > 1:686825‑M2/1‑10 (MQ=255) acCGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagta > 2:652387‑M2/1‑10 (MQ=255) ccGCTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagtaa > 1:1222714‑M2/1‑9 (MQ=255) gCTGAACgggattatttcaccctccgggaacgactggtaatgatgccggcccaacttgaaggtgctcagcactacataaccgaactgtggttattataaaa < 2:1281823‑M2/101‑95 (MQ=255) cTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagtaaaat > 1:799422‑M2/1‑6 (MQ=255) cTGAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagtaaaat < 2:129450‑M2/101‑96 (MQ=255) gAACgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagtaaaatct < 1:866040‑M2/101‑98 (MQ=255) aCgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagtaaaatctta > 2:1058489‑M2/1‑2 (MQ=255) cgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagtaaaatcttaa > 2:657792‑M2/1‑1 (MQ=255) cgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagtaaaatcttaa < 1:233973‑M2/101‑101 (MQ=255) cgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagtaaaatcttaa > 2:445413‑M2/1‑1 (MQ=255) cgggattatttcaccctccgggaacgactggtaatgatgcaggcccaacttgaaggtgctcagcaatacataaccgaacagtgtttaaagtaaaatcttaa < 1:357303‑M2/101‑101 (MQ=255) | CGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGAGAGAGGCTGATCACTATGCAAAAACAACTGGAAGGAACCCAGAAGTATATTAATGAGCAGTGCAGATAGAGCTGCCCATA > 193/2165‑2364 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |