| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 189 | 1 = | 0 (0.000) | 45 (0.680) | 36/198 | 0.6 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 207 | = 3728 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CTGCAGAACTGGCCGAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑A > 207/3630‑3729 | cTGCAGAACTGGCCGAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCag > 2:821633‑M2/1‑99 (MQ=255)cTGCAGAACTGGCCGAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCag < 1:1365823‑M2/101‑3 (MQ=255) tGCAGAACTGGCCGAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCagg > 2:1525625‑M2/1‑98 (MQ=255) tGCAGAACTGGCCGAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCagg > 1:520854‑M2/1‑98 (MQ=255) aGAACTGGCCGAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggcta < 1:1439599‑M2/101‑7 (MQ=255) gAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgttt > 2:228936‑M2/1‑85 (MQ=255) gAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgttt < 2:12936‑M2/101‑17 (MQ=255) gAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaacgccgctt < 1:191697‑M2/101‑17 (MQ=255) gTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcat > 1:796327‑M2/1‑81 (MQ=255) tATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattc < 1:1340058‑M2/101‑23 (MQ=255) ccGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgc < 1:1341798‑M2/101‑27 (MQ=255) gTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgc < 1:1242088‑M2/101‑29 (MQ=255) gAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaaccccctttgcattcccgcgccccgcc < 2:869757‑M2/101‑35 (MQ=255) cagcGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtg > 2:591855‑M2/1‑64 (MQ=255) cagcGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtg > 2:1242083‑M2/1‑64 (MQ=255) ggTTCAGGAGAAACCCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaac > 1:18527‑M2/1‑59 (MQ=255) ggTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaac > 1:485367‑M2/1‑59 (MQ=255) ggTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaac > 2:1238757‑M2/1‑59 (MQ=255) cAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgccgtgtgaacgcct < 1:1022259‑M2/101‑47 (MQ=255) aaaaCCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacc > 2:1294883‑M2/1‑49 (MQ=255) aaaaCCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacc > 2:1365817‑M2/1‑49 (MQ=255) ccgccgGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgcggtgtgaacgcccgttacctcgc < 2:45304‑M2/101‑57 (MQ=255) cgGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactca > 1:168300‑M2/1‑41 (MQ=255) ggCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaac > 1:1160218‑M2/1‑39 (MQ=255) cTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacgg < 1:444328‑M2/101‑65 (MQ=255) gAGCATAAAAATCAGATCCTCTCTTTTTTAGGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggctt > 2:161688‑M2/1‑34 (MQ=255) cATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttaca > 1:917048‑M2/1‑31 (MQ=255) cATAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttaca > 1:517261‑M2/1‑31 (MQ=255) aTAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacag < 2:1361560‑M2/101‑72 (MQ=255) aTAAAAATCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacag < 1:79296‑M2/101‑72 (MQ=255) tAAAAATCAGATCCTCTCTTTTTTATGGCaggcgaaccgccgtttgcatttccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacaga < 2:1190842‑M2/101‑73 (MQ=255) aaaTCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacagaatt > 1:1687899‑M2/1‑26 (MQ=255) aaaTCAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccccgccccgctgtgtgaacgcctttcacctgtactcaacggcttacagaatt < 2:257871‑M2/101‑76 (MQ=255) cAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacagaatttaac > 1:1292556‑M2/1‑22 (MQ=255) cAGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacagaatttaac > 2:361751‑M2/1‑22 (MQ=255) aGATCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccccgccccgctgtgtggacgcctgtcacctgtactcaacggcttacagaatttaacc < 1:1338517‑M2/101‑81 (MQ=255) aTCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacagaatttaaccct < 1:213161‑M2/101‑83 (MQ=255) tCCTCTCTTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacagaatttaaccctg < 1:1404446‑M2/101‑84 (MQ=255) tctctTTTTTATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacagaatttaaccctgcta < 1:1570161‑M2/101‑87 (MQ=255) ttATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtgctcaacggcttacagaatttaaccctgctacgtgatat > 1:1072529‑M2/1‑7 (MQ=255) ttATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacagaatttaaccctgctacgtgatat < 1:1154864‑M2/101‑95 (MQ=255) tATGGCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacagaatttaaccctgctacgtgatatc > 2:1340052‑M2/1‑6 (MQ=255) ggCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacagaatttaaccctgctacgtgatatcgaa < 2:1000209‑M2/101‑99 (MQ=255) gCaggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacagaatttaaccctgctacgtgatatcgaat < 1:102056‑M2/101‑100 (MQ=255) caggctaaccgccgtttgcattcccgcgccccgctgtgtgaacgcctgtcacctgtactcaacggcttacagaatttaaccctgctacgtgatatcgaatt > 1:1609235‑M2/1‑1 (MQ=255) | CTGCAGAACTGGCCGAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑A > 207/3630‑3729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |