New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 188 1 =0 (0.000)60 (0.900) 43/200 0.2 100% intergenic (–/–) –/– –/–
?46 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAAC  >  46/1‑101
                                                                                                 |                                                                                                    
ttttgaaagtgatggtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccAggg                                                                                                   <  2:1247788‑M2/4‑1 (MQ=255)
  tggtgaattatggtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACgggg                                                                                                 <  1:491171‑M2/6‑1 (MQ=255)
   tgaaagtgatggtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccAGGGGTa                                                                                               <  2:834797‑M2/7‑1 (MQ=255)
   ggtgaattatggtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGt                                                                                                <  2:1495247‑M2/7‑1 (MQ=255)
   ggtgaattatggtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGt                                                                                                >  1:450211‑M2/95‑101 (MQ=255)
     tgaattatggtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTaa                                                                                              <  2:1483470‑M2/9‑1 (MQ=255)
      gaattatggtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAAt                                                                                             <  2:1136417‑M2/10‑1 (MQ=255)
        gtgatggtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccAGGGGtaattca                                                                                          <  2:203079‑M2/12‑4 (MQ=255)
        attatggtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGc                                                                                           >  2:336853‑M2/90‑101 (MQ=255)
         ttatggtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCt                                                                                          >  1:1300913‑M2/89‑101 (MQ=255)
         tgatggtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccAGGGgtaattcaa                                                                                         <  1:1630862‑M2/13‑5 (MQ=255)
              gtggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTa                                                                                     <  1:1668276‑M2/18‑1 (MQ=255)
               tggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTAc                                                                                    <  2:674452‑M2/19‑1 (MQ=255)
                ggtgggggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACt                                                                                   <  2:189210‑M2/20‑1 (MQ=255)
                     gggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCt                                                                              <  1:782665‑M2/25‑1 (MQ=255)
                     gggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCt                                                                              <  1:809783‑M2/25‑1 (MQ=255)
                      ggaaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTg                                                                             >  1:817862‑M2/76‑101 (MQ=255)
                        aaggattcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCt                                                                           >  1:1197527‑M2/74‑101 (MQ=255)
                            attcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCt                                                                       >  1:664410‑M2/70‑101 (MQ=255)
                               cgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTAt                                                                    >  1:1358161‑M2/67‑101 (MQ=255)
                                gaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATc                                                                   >  2:97054‑M2/66‑101 (MQ=255)
                                gaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATc                                                                   >  1:1354416‑M2/66‑101 (MQ=255)
                                 aaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCg                                                                  <  1:1516235‑M2/37‑1 (MQ=255)
                                  accttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCgg                                                                 <  1:418720‑M2/38‑1 (MQ=255)
                                     ttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGaa                                                              <  2:1702542‑M2/41‑1 (MQ=255)
                                     ttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGaa                                                              <  1:206378‑M2/41‑1 (MQ=255)
                                        gaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCg                                                           >  1:1292467‑M2/58‑101 (MQ=255)
                                        gaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCg                                                           <  1:1264601‑M2/44‑1 (MQ=255)
                                         aagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCgg                                                          <  2:1286098‑M2/45‑1 (MQ=255)
                                         aagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCgg                                                          <  1:336853‑M2/45‑1 (MQ=255)
                                           gtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCgggg                                                        <  1:1025051‑M2/47‑1 (MQ=255)
                                            tcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGgc                                                       <  1:1584038‑M2/48‑1 (MQ=255)
                                               atgacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGca                                                    >  1:483429‑M2/51‑101 (MQ=255)
                                                 gacggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGcatc                                                  <  1:957034‑M2/53‑1 (MQ=255)
                                                  acggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGcatca                                                 >  1:987270‑M2/48‑101 (MQ=255)
                                                   cggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGcatcat                                                <  1:1646560‑M2/55‑1 (MQ=255)
                                                   cggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGcatcat                                                <  2:1065302‑M2/55‑1 (MQ=255)
                                                    ggcagatttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGAGCATCata                                               >  2:1554676‑M2/46‑101 (MQ=255)
                                                         atttacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCaaa                                          >  1:512413‑M2/41‑101 (MQ=255)
                                                            tacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGa                                       <  1:655585‑M2/64‑1 (MQ=255)
                                                            tacagtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGa                                       <  1:7385‑M2/64‑1 (MQ=255)
                                                               agtctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGAcgc                                    >  2:746099‑M2/35‑101 (MQ=255)
                                                                 tctgctccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACgcgc                                  >  2:923824‑M2/33‑101 (MQ=255)
                                                                       ccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGt                            <  1:1231383‑M2/75‑1 (MQ=255)
                                                                       ccctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGt                            >  2:1694774‑M2/27‑101 (MQ=255)
                                                                        cctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGAGCCGCTGTa                           >  1:454649‑M2/26‑101 (MQ=255)
                                                                         ctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGGGCATCATATCAAATGACGCGCCGCTGTaa                          >  1:1556926‑M2/25‑101 (MQ=255)
                                                                         ctttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTaa                          >  1:1114499‑M2/25‑101 (MQ=255)
                                                                         ctttggccgctcgggaaccccaccACGGGGGAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGGAACCTATCAAATGACGCGCCCCTGGaa                          >  1:1458993‑M2/25‑101 (MQ=255)
                                                                           ttggccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAg                        <  1:1135784‑M2/79‑1 (MQ=255)
                                                                            tggccgctcgggaaccccaccACGGGGGAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGGGCATCATATCAAATGACGCGCCGCTGTAAagg                       >  2:173424‑M2/22‑100 (MQ=255)
                                                                               ccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTATAGTGtt                    <  2:1245370‑M2/83‑1 (MQ=255)
                                                                               ccgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGtt                    >  2:1385080‑M2/19‑101 (MQ=255)
                                                                                cgctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTa                   >  2:1111080‑M2/18‑101 (MQ=255)
                                                                                  ctcgggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGGGCATCATATCAAATGACGCGCCGCTGTAAAGTGGTACg                 >  1:56930‑M2/16‑101 (MQ=255)
                                                                                     gggaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTg              >  1:532547‑M2/13‑101 (MQ=255)
                                                                                       gaaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTgag            <  2:1680614‑M2/91‑1 (MQ=255)
                                                                                        aaccccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTgaga           >  1:1538061‑M2/10‑101 (MQ=255)
                                                                                           cccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTAGCGGGAAGCGGGGCACATCATATCAAATGACGCGGCGCTGCAAAGTGTTACGTTGGaaaaa       >  2:1590568‑M2/7‑101 (MQ=255)
                                                                                            ccaccACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGaaaaa       <  2:210448‑M2/96‑1 (MQ=255)
                                                                                                 aCGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAAc  <  2:1213096/101‑1 (MQ=255)
                                                                                                 |                                                                                                    
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAAC  >  46/1‑101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.