| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 184 | 1 = | 0 (0.000) | 24 (0.400) +TGCCGGATGCG |
19/178 | 1.8 | 50.4% | intergenic (–/–) | –/– | –/– |
| ? | 196 | 5176 = | 53 (0.800) | intergenic (–/–) | –/– | –/– | |||||
CCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCT‑ > 196/5076‑5276 | gacggcgctgaagacgcacaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgg < 2:124747‑M2/1‑1 (MQ=255)gacggcgctgaagacgcacaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgg > 1:312621‑M2/101‑101 (MQ=255)ccAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATGCTTGTGCTGGACGTAg < 2:134161/101‑1 (MQ=255)ccAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAg < 1:1364262/101‑1 (MQ=255)ccAGTCGCGGCCGGGCAAACCAGGGTAACATAGGATCAATGAGGGATAGAGCATATGCGTCAGTCCTCAAACAGACAGGGAACAACTTGGGATGGACGTAg > 2:1627325/1‑101 (MQ=255) cggcgctgaagacgcacaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcggcg < 2:1485510‑M2/3‑1 (MQ=255) aGTGGCGGACGGGCAAACAAGGGTAACATAGGGTCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCg > 1:82774/1‑101 (MQ=255) gTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGt > 1:1414796/1‑101 (MQ=255) gTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGt > 1:253152/1‑101 (MQ=255) ggCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTaa < 1:557030/101‑1 (MQ=255) gCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTaaa < 1:1205838/101‑1 (MQ=255) ctgaagacgcacaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAAc > 2:731411‑M2/94‑101 (MQ=255) ggACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACg > 2:610370/1‑101 (MQ=255) aagacgcacaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGcc > 2:1480775‑M2/91‑101 (MQ=255) aagacgcacaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGcc > 1:1016822‑M2/91‑101 (MQ=255) agacgcacaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCt > 2:230115‑M2/90‑101 (MQ=255) gggCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTg < 1:125522/101‑1 (MQ=255) gggCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTg > 1:898388/1‑101 (MQ=255) gacgcacaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCctt < 2:1334790‑M2/13‑2 (MQ=255) gacgcacaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCctt < 1:995995‑M2/13‑2 (MQ=255) gcacaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATc < 2:564314‑M2/16‑1 (MQ=255) cAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATc < 2:768729/101‑1 (MQ=255) cacaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATcc > 1:1697599‑M2/85‑101 (MQ=255) acaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCg > 2:1520219‑M2/84‑101 (MQ=255) acaagacgatctggtgccgtcaatccaggacgatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCg < 1:123333‑M2/18‑1 (MQ=255) aaCAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCg > 1:256413/1‑101 (MQ=255) aaCAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCg > 1:1498608/1‑101 (MQ=255) gTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACg < 1:1164062/101‑1 (MQ=255) gTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACg > 1:1570235/1‑101 (MQ=255) aTAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCg > 1:550107/1‑101 (MQ=255) aGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGa > 1:1234657/1‑101 (MQ=255) tCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGAtttt > 1:1705533/1‑101 (MQ=255) aaTGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGt < 1:588637/101‑1 (MQ=255) aTGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTa > 2:1367978/1‑101 (MQ=255) tGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAg > 2:1122600/1‑101 (MQ=255) agagCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATa > 2:244401/1‑101 (MQ=255) gatggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGa < 1:1346407‑M2/49‑1 (MQ=255) tggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGAcg > 1:83079‑M2/51‑101 (MQ=255) tggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGAcg < 1:326842‑M2/51‑1 (MQ=255) ggctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGAcgc < 1:242082‑M2/52‑1 (MQ=255) gctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGAcgcg < 2:878625‑M2/53‑1 (MQ=255) atatGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGAcg > 2:204558/1‑101 (MQ=255) ctgcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑GTTGTAGGCCTGATAAGacgcgc > 1:1578099‑M2/48‑100 (MQ=255) atGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGAcgcg < 2:1043233/101‑1 (MQ=255) gcgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAagacgcgcca < 2:1016817‑M2/56‑4 (MQ=255) cgaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATaagacgcgccag > 1:463790‑M2/45‑97 (MQ=255) gaaagcggcgcatgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGataagacgccccagc > 2:321668‑M2/44‑95 (MQ=255) gTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAg > 1:1288476/1‑101 (MQ=255) gTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCggc > 2:1178131/1‑99 (MQ=255) catgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAg < 1:1022970‑M2/68‑1 (MQ=255) cAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATc > 2:1464982/1‑101 (MQ=255) atgtaagatctgatattgagatgccggatgcgGCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAgg > 2:1112380‑M2/33‑101 (MQ=255) aaaCAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTTTAGGCCTGATAAGACGCGGTAGCGTCGCATCa > 2:1349995/1‑101 (MQ=255) acagacagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAgg < 1:480417/101‑1 (MQ=255) cagacagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGc > 1:352614/1‑101 (MQ=255) cagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCt < 1:786481/101‑1 (MQ=255) cagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCt < 2:1579497/101‑1 (MQ=255) cagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCt < 1:483382/101‑1 (MQ=255) cagGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCt < 2:1474720/101‑1 (MQ=255) ggAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGtt < 1:1211574/101‑1 (MQ=255) gAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGCTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTg > 2:471284/1‑101 (MQ=255) aaaTACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGc < 1:1604406/101‑1 (MQ=255) aaTACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGcc > 1:1016033/1‑101 (MQ=255) aaTACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGcc < 2:1501105/101‑1 (MQ=255) aTACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCg < 1:191373/101‑1 (MQ=255) tACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCgg < 1:1206421/101‑1 (MQ=255) aCTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGa > 2:1369845/1‑101 (MQ=255) cTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGAt > 1:931999/1‑101 (MQ=255) tgtgCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATgc > 2:86415/1‑101 (MQ=255) tgCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATgcgg < 1:1250473/101‑1 (MQ=255) cTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATgcggcg < 1:204558/101‑1 (MQ=255) gACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTaa > 1:1236789/1‑101 (MQ=255) gACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTaa < 2:1292511/101‑1 (MQ=255) tgcggCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGc > 1:1155039/5‑101 (MQ=2) cGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAAc < 1:1367655/101‑1 (MQ=255) cGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAAc < 2:1414790/101‑1 (MQ=255) cGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAAc < 1:715484/101‑1 (MQ=255) gTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACg > 1:793518/1‑101 (MQ=255) cggCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCGGGCTCCGGGTGCCGGATGCAGCGTGAACGCCt > 1:774190/3‑101 (MQ=2) cggCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGGGAACGCCt > 2:1490262/3‑101 (MQ=2) ggCGTAAACGCCTTATCCGGCCTACGGCTCGG‑‑TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCtt < 2:1296606/100‑2 (MQ=2) | CCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATACTTGTGCTGGACGTAGCGTAAACGCCTGATCCGTCCAACGGTTCGGATTTTGTAGGCCTGATAAGACGCGGTAGCGTCGCATCAGGCATCTGTTGCCGGATGCGGCGTAAACGCCT‑ > 196/5076‑5276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |