New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 172 | = 85 | 15 (0.230) | 42 (0.630) | 33/200 | 0.9 | 84.9% | intergenic (–/–) | –/– | –/– |
? | 80 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGC > 80/1‑100 | gctacgcttatcaggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAg < 2:147659‑M2/11‑1 (MQ=255) ctacgcttatcaggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGc > 2:1638678‑M2/90‑101 (MQ=255) acgcttatcaggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCa > 1:718506‑M2/88‑101 (MQ=255) acatatcaggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAAt > 2:442902‑M2/86‑101 (MQ=255) ttatcaggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATaa > 2:516875‑M2/84‑101 (MQ=255) ggcctacatggttcctgcaatttattgattttgcaagactttgggggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATAc < 2:285314‑M2/24‑1 (MQ=255) ggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATAc > 1:151047‑M2/78‑101 (MQ=255) gcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATAcc < 2:1644558‑M2/25‑1 (MQ=255) ctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCgg > 1:1579257‑M2/75‑101 (MQ=255) tacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGc > 1:121048‑M2/74‑101 (MQ=255) catcgttcctgcaatttattgtttttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGt < 1:255733‑M2/30‑1 (MQ=255) atcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGtt > 2:502984‑M2/71‑101 (MQ=255) atcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGtt > 1:620370‑M2/71‑101 (MQ=255) cgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTAt < 1:1491359‑M2/33‑1 (MQ=255) gttcctgcaatttattgattttgcaagcctttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATg < 1:1622450‑M2/34‑1 (MQ=255) gttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATg > 1:1429244‑M2/68‑101 (MQ=255) cctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCg > 1:1480471‑M2/65‑101 (MQ=255) cctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCg > 1:1651980‑M2/65‑101 (MQ=255) atttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTAttt < 1:709352‑M2/43‑1 (MQ=255) atttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTAttt > 1:1448558‑M2/59‑101 (MQ=255) tttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTAtttt > 1:599568‑M2/58‑101 (MQ=255) ttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTAttttt > 2:293244‑M2/57‑101 (MQ=255) ttgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTa > 2:1495640‑M2/54‑101 (MQ=255) gattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACg < 1:1066320‑M2/50‑1 (MQ=255) gcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAagag > 2:1082265‑M2/46‑101 (MQ=255) gcaagactttgtgggtcggataaggcgtccacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAagag < 2:1583378‑M2/56‑1 (MQ=255) caagactttgtgggccggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAgg > 2:829277‑M2/45‑101 (MQ=255) actttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATAACGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATc > 2:1539160‑M2/41‑101 (MQ=255) acttggtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATc < 1:1394632‑M2/61‑1 (MQ=255) ctttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCa > 1:1180382‑M2/40‑101 (MQ=255) tgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAAt < 1:713549‑M2/65‑1 (MQ=255) tgtgggtcggataaggcgttcacgccgcatccggaaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAAt < 2:616629‑M2/65‑1 (MQ=255) gtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATg > 2:1296918‑M2/36‑101 (MQ=255) gggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCg < 1:797553‑M2/68‑1 (MQ=255) aaacgggattcaggccgcttccgccaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAAtt < 1:177651‑M2/75‑1 (MQ=255) cgcatccgaaaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATg < 1:540188‑M2/90‑1 (MQ=255) ctccgacaAAAACAGCGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTg < 1:1098864‑M2/93‑1 (MQ=255) ggcaaaaaCAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCt < 1:526976/97‑1 (MQ=255) ggaaAAAAAAAGGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATCGTGACCt < 2:1429238‑M2/97‑1 (MQ=255) gaaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCtt < 1:1657960‑M2/98‑1 (MQ=255) gaaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCtt < 1:880435‑M2/98‑1 (MQ=255) aAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGc > 1:760000‑M2/2‑101 (MQ=255) aAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGc > 2:954051‑M2/2‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGC > 80/1‑100 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |