New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 172 = 8515 (0.230)42 (0.630) 33/200 0.9 84.9% intergenic (–/–) –/– –/–
?80 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGC  >  80/1‑100
                                                                                          |                                                                                                   
gctacgcttatcaggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAg                                                                                           <  2:147659‑M2/11‑1 (MQ=255)
 ctacgcttatcaggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGc                                                                                          >  2:1638678‑M2/90‑101 (MQ=255)
   acgcttatcaggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCa                                                                                        >  1:718506‑M2/88‑101 (MQ=255)
     acatatcaggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAAt                                                                                      >  2:442902‑M2/86‑101 (MQ=255)
       ttatcaggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATaa                                                                                    >  2:516875‑M2/84‑101 (MQ=255)
             ggcctacatggttcctgcaatttattgattttgcaagactttgggggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATAc                                                                              <  2:285314‑M2/24‑1 (MQ=255)
             ggcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATAc                                                                              >  1:151047‑M2/78‑101 (MQ=255)
              gcctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATAcc                                                                             <  2:1644558‑M2/25‑1 (MQ=255)
                ctacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCgg                                                                           >  1:1579257‑M2/75‑101 (MQ=255)
                 tacatcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGc                                                                          >  1:121048‑M2/74‑101 (MQ=255)
                   catcgttcctgcaatttattgtttttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGt                                                                        <  1:255733‑M2/30‑1 (MQ=255)
                    atcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGtt                                                                       >  2:502984‑M2/71‑101 (MQ=255)
                    atcgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGtt                                                                       >  1:620370‑M2/71‑101 (MQ=255)
                      cgttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTAt                                                                     <  1:1491359‑M2/33‑1 (MQ=255)
                       gttcctgcaatttattgattttgcaagcctttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATg                                                                    <  1:1622450‑M2/34‑1 (MQ=255)
                       gttcctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATg                                                                    >  1:1429244‑M2/68‑101 (MQ=255)
                          cctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCg                                                                 >  1:1480471‑M2/65‑101 (MQ=255)
                          cctgcaatttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCg                                                                 >  1:1651980‑M2/65‑101 (MQ=255)
                                atttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTAttt                                                           <  1:709352‑M2/43‑1 (MQ=255)
                                atttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTAttt                                                           >  1:1448558‑M2/59‑101 (MQ=255)
                                 tttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTAtttt                                                          >  1:599568‑M2/58‑101 (MQ=255)
                                  ttattgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTAttttt                                                         >  2:293244‑M2/57‑101 (MQ=255)
                                     ttgattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTa                                                      >  2:1495640‑M2/54‑101 (MQ=255)
                                       gattttgcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACg                                                    <  1:1066320‑M2/50‑1 (MQ=255)
                                             gcaagactttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAagag                                              >  2:1082265‑M2/46‑101 (MQ=255)
                                             gcaagactttgtgggtcggataaggcgtccacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAagag                                              <  2:1583378‑M2/56‑1 (MQ=255)
                                              caagactttgtgggccggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAgg                                             >  2:829277‑M2/45‑101 (MQ=255)
                                                  actttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATAACGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATc                                         >  2:1539160‑M2/41‑101 (MQ=255)
                                                  acttggtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATc                                         <  1:1394632‑M2/61‑1 (MQ=255)
                                                   ctttgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCa                                        >  1:1180382‑M2/40‑101 (MQ=255)
                                                      tgtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAAt                                     <  1:713549‑M2/65‑1 (MQ=255)
                                                      tgtgggtcggataaggcgttcacgccgcatccggaaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAAt                                     <  2:616629‑M2/65‑1 (MQ=255)
                                                       gtgggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATg                                    >  2:1296918‑M2/36‑101 (MQ=255)
                                                         gggtcggataaggcgttcacgccgcatccggcaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCg                                  <  1:797553‑M2/68‑1 (MQ=255)
                                                                aaacgggattcaggccgcttccgccaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAAtt                           <  1:177651‑M2/75‑1 (MQ=255)
                                                                               cgcatccgaaaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATg            <  1:540188‑M2/90‑1 (MQ=255)
                                                                                  ctccgacaAAAACAGCGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTg         <  1:1098864‑M2/93‑1 (MQ=255)
                                                                                      ggcaaaaaCAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCt     <  1:526976/97‑1 (MQ=255)
                                                                                      ggaaAAAAAAAGGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATCGTGACCt     <  2:1429238‑M2/97‑1 (MQ=255)
                                                                                       gaaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCtt    <  1:1657960‑M2/98‑1 (MQ=255)
                                                                                       gaaAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCtt    <  1:880435‑M2/98‑1 (MQ=255)
                                                                                         aAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGc  >  1:760000‑M2/2‑101 (MQ=255)
                                                                                         aAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGc  >  2:954051‑M2/2‑101 (MQ=255)
                                                                                          |                                                                                                   
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTATTTTTTTACGAAAGAGGTATCAAATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGC  >  80/1‑100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.