New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 166 = 83980 (0.000)56 (1.240)
+CGTGAACGCCTTATCCGGCCTACAAAATCATG
45/136 0.1 100% intergenic (–/–) –/– –/–
?45 = 30869 0 (0.000)intergenic (–/–) –/– –/–

AAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  45/30770‑30869
                                                                                                   |                                                                                                   
aaaGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTc                                                                                                    >  1:524350‑M2/1‑100 (MQ=255)
aaaGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACACTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTc                                                                                                    >  2:919686‑M2/1‑100 (MQ=255)
  aGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTTATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGGATTTAATTTTcat                                                                                                  <  1:1366856‑M2/101‑4 (MQ=255)
   gcggcgAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatg                                                                                                 >  2:1013922‑M2/1‑97 (MQ=255)
   gcggcgAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatg                                                                                                 <  1:797154‑M2/101‑5 (MQ=255)
    cggcgAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAAACTTGCAATGTATTGAAtttttatta                                                                                                >  1:330816/1‑96 (MQ=255)
     ggcgAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgat                                                                                               >  2:1528843‑M2/1‑95 (MQ=255)
        gAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgatttt                                                                                            >  1:443071‑M2/1‑92 (MQ=255)
        gAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCCACGCTTATCCGGCCCACGAAAAACTTGCAATGTATTGAATTTTcatgatttt                                                                                            <  2:1630608‑M2/101‑10 (MQ=255)
         aaTATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTtatgattttt                                                                                           <  1:113208‑M2/101‑11 (MQ=255)
         aaTATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttg                                                                                           >  2:1161525‑M2/1‑91 (MQ=255)
         aaTATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATATTTCAATGTATTGAATTTTcttgattttt                                                                                           <  2:1582890‑M2/101‑11 (MQ=255)
           tatCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgta                                                                                         >  1:1480257‑M2/1‑89 (MQ=255)
            atCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtag                                                                                        >  2:686878‑M2/1‑88 (MQ=255)
                atatTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccg                                                                                    <  2:1657564‑M2/101‑18 (MQ=255)
                 tatTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccgg                                                                                   >  2:695170‑M2/1‑83 (MQ=255)
                  atTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccgga                                                                                  <  2:970541‑M2/101‑20 (MQ=255)
                   tttAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggat                                                                                 >  1:175961‑M2/1‑81 (MQ=255)
                    ttAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAAGCCTACGAAAAACTTGCAATGTATTGAATTTTtatgattttttaggccgggta                                                                                <  2:84438‑M2/101‑22 (MQ=255)
                      aaTGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataag                                                                              >  2:1382483‑M2/1‑78 (MQ=255)
                       aTGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataagg                                                                             <  2:501930‑M2/101‑25 (MQ=255)
                              tAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAAGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcac                                                                      <  1:270181‑M2/101‑32 (MQ=255)
                                 ccATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgcc                                                                   >  2:271631‑M2/1‑67 (MQ=255)
                                  cATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccg                                                                  >  1:498686‑M2/1‑66 (MQ=255)
                                      cGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatc                                                              <  1:1045253‑M2/101‑40 (MQ=255)
                                       gAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAAACTTTCAATGTATTGAATTTTcatgattttttaggccggataagggggtcacgccgcatcc                                                             <  2:94047‑M2/101‑41 (MQ=255)
                                        aGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccg                                                            >  1:1403945‑M2/1‑60 (MQ=255)
                                          cGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggc                                                          >  1:838044‑M2/1‑58 (MQ=255)
                                          cGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggc                                                          <  2:678224‑M2/101‑44 (MQ=255)
                                           gTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggca                                                         <  1:1341136‑M2/101‑45 (MQ=255)
                                            tGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaa                                                        <  1:324323‑M2/101‑46 (MQ=255)
                                             gCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaag                                                       >  2:271649‑M2/1‑55 (MQ=255)
                                                tGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaag                                                    <  2:199597‑M2/101‑50 (MQ=255)
                                                 gATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagc                                                   <  2:1261896‑M2/101‑51 (MQ=255)
                                                         aCGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggggttcccgccgcatccggcaagaagctataagaa                                           >  1:1396010‑M2/1‑43 (MQ=255)
                                                          cGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaa                                          >  2:1655891‑M2/1‑42 (MQ=255)
                                                          cGCTTATCAGGCCTACGAAAATCTTGAAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaa                                          >  2:350463‑M2/1‑42 (MQ=255)
                                                           gCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaa                                         >  1:501935‑M2/1‑41 (MQ=255)
                                                            cTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaag                                        >  1:1615538‑M2/1‑40 (MQ=255)
                                                            cTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaag                                        >  2:1680688‑M2/1‑40 (MQ=255)
                                                            cTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaag                                        <  2:1185501‑M2/101‑62 (MQ=255)
                                                             ttATCAGGCCTACGAAAATCTTGCAATGAATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagg                                       <  1:1133827‑M2/101‑63 (MQ=255)
                                                              tATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaaggg                                      >  2:112135‑M2/1‑38 (MQ=255)
                                                               aTCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggc                                     <  1:1289024‑M2/101‑65 (MQ=255)
                                                               aTCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggc                                     >  2:786631‑M2/1‑37 (MQ=255)
                                                               aTCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggc                                     <  2:1379324‑M2/101‑65 (MQ=255)
                                                               aTCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggc                                     >  1:483578‑M2/1‑37 (MQ=255)
                                                                      cTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatc                              <  2:1612929‑M2/101‑72 (MQ=255)
                                                                      cTACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcggtcacggcgcatccggcaagaagctataagaaaagggcggagatc                              <  1:706663‑M2/101‑72 (MQ=255)
                                                                       tACGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatca                             <  2:717148‑M2/101‑73 (MQ=255)
                                                                        aaaaaaatctTGCAATGTATTGAATTTTcttgattttgtaggcgggataaggcgttcacgcctaatccggcaagaagctataagaaaagggcggagatcat                            >  1:820554‑M2/4‑28 (MQ=255)
                                                                        aCGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcat                            <  2:162047‑M2/101‑74 (MQ=255)
                                                                        aCGAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcat                            >  1:1610755‑M2/1‑28 (MQ=255)
                                                                          gAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatct                          >  1:992394‑M2/1‑26 (MQ=255)
                                                                          gAAAATCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatct                          <  2:1164185‑M2/101‑76 (MQ=255)
                                                                            aaaTCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctcc                        >  1:1019173‑M2/1‑24 (MQ=255)
                                                                            aaaTCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctcc                        >  2:669593‑M2/1‑24 (MQ=255)
                                                                            aaaTCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctcc                        >  1:405799‑M2/1‑24 (MQ=255)
                                                                              aTCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgc                      <  2:714635‑M2/101‑80 (MQ=255)
                                                                               tCTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctcctcc                     <  1:1384153‑M2/101‑81 (MQ=255)
                                                                                cTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccc                    >  2:797149‑M2/1‑20 (MQ=255)
                                                                                cTTGCAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccc                    <  2:191095‑M2/101‑82 (MQ=255)
                                                                                    cAATGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttt                <  2:101642‑M2/101‑86 (MQ=255)
                                                                                      ttttattGATTTTTgatgattttgcaggccgaataaggggttcacgccgcctcgggcaagaagctataagaaaagggcggagatcatctccgcccttttta              >  2:63403‑M2/4‑14 (MQ=255)
                                                                                       tGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttat             >  1:671332‑M2/1‑13 (MQ=255)
                                                                                       tGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttat             <  2:1705118‑M2/101‑89 (MQ=255)
                                                                                       tGTATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttat             >  1:1173537‑M2/1‑13 (MQ=255)
                                                                                         tATTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttattt           <  1:1397873‑M2/101‑91 (MQ=255)
                                                                                          aTTGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttatttc          >  1:1612935‑M2/1‑10 (MQ=255)
                                                                                           ttAAATTTTcaagattttgtaggccggataaggggttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttatttct         >  1:1641387‑M2/1‑9 (MQ=255)
                                                                                            tGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttatttctg        <  1:665598‑M2/101‑94 (MQ=255)
                                                                                            tGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttatttctg        <  1:1669070‑M2/101‑94 (MQ=255)
                                                                                            tGAATTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttatttctg        >  1:1708896‑M2/1‑8 (MQ=255)
                                                                                              aaTTTTcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttatttctgca      <  1:932312‑M2/101‑96 (MQ=255)
                                                                                                ttttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttatttctgcaat    >  2:524152‑M2/1‑4 (MQ=255)
                                                                                                ttttcatgattttgcgggcgtgataaggggttcccgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttatttctgcaat    >  1:24431‑M2/1‑4 (MQ=255)
                                                                                                  ttcatgattttgtagtccagataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttatttctgcaatcc  >  1:199597‑M2/1‑2 (MQ=255)
                                                                                                  ttcatgattttgtaggccggataaggcgttcacgccgcatccggcaagaagctataagaaaagggcggagatcatctccgccctttttatttctgcaatcc  <  2:253233‑M2/101‑100 (MQ=255)
                                                                                                   |                                                                                                   
AAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  45/30770‑30869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.