| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 16 | = 47700 | 0 (0.000) | 58 (0.930) +GCAGCA |
49/188 | 0.2 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 190 | = 6342 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 190/6243‑6342 | tGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCt < 1:170293‑M2/101‑2 (MQ=255) gCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtg > 1:738607‑M2/1‑99 (MQ=255) tGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctg > 1:339604‑M2/1‑96 (MQ=255) gCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcg > 2:1175392‑M2/1‑94 (MQ=255) cAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgc < 2:321171‑M2/101‑9 (MQ=255) aCTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttc > 2:1458110‑M2/1‑89 (MQ=255) cttcttGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttcc > 1:951904‑M2/1‑88 (MQ=255) cttcttGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttcc < 1:1687059‑M2/101‑14 (MQ=255) tcttGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgc > 1:900331‑M2/1‑86 (MQ=255) cttGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgcc < 1:1663110‑M2/101‑17 (MQ=255) cAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctt < 1:181586‑M2/101‑21 (MQ=255) cAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctt < 1:1524710‑M2/101‑21 (MQ=255) cAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctt < 2:649896‑M2/101‑21 (MQ=255) aGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgcttt < 1:1606061‑M2/101‑22 (MQ=255) ggCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttg < 1:730185‑M2/101‑23 (MQ=255) cTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcg > 1:1337208‑M2/1‑77 (MQ=255) gACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgcgttgccga < 2:1597744‑M2/101‑27 (MQ=255) cTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatg < 1:148446‑M2/101‑29 (MQ=255) cgcCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtga > 2:60526‑M2/1‑70 (MQ=255) ccAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgctc < 2:1284769‑M2/101‑34 (MQ=255) aGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatcca < 1:751689‑M2/101‑36 (MQ=255) aGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatcca < 1:349357‑M2/101‑36 (MQ=255) aGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatcca > 2:1262125‑M2/1‑66 (MQ=255) aGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatcca > 1:1328802‑M2/1‑66 (MQ=255) ttGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccaca > 2:1471972‑M2/1‑64 (MQ=255) ggTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatc > 2:472265‑M2/1‑61 (MQ=255) ttAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgattcacaattgg < 2:1166947‑M2/101‑43 (MQ=255) tAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatccgc < 2:511332‑M2/101‑44 (MQ=255) aCTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctc < 1:140255‑M2/101‑46 (MQ=255) cTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctca < 1:451233‑M2/101‑47 (MQ=255) cAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccg > 2:456552‑M2/1‑52 (MQ=255) cAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccg > 2:217020‑M2/1‑52 (MQ=255) gCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaac > 2:1713967‑M2/1‑47 (MQ=255) cGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaacc < 1:1071757‑M2/101‑56 (MQ=255) gCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccat > 2:170293‑M2/1‑44 (MQ=255) gCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccat > 2:349357‑M2/1‑44 (MQ=255) cAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatg > 1:649901‑M2/1‑43 (MQ=255) acCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaat > 2:1524704‑M2/1‑39 (MQ=255) ccGGCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaata > 1:822851‑M2/1‑38 (MQ=255) ccGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaata > 1:1694736‑M2/1‑38 (MQ=255) cGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataa > 2:861774‑M2/1‑37 (MQ=255) ccccACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaat > 1:1166952‑M2/1‑35 (MQ=255) ccACGCAGAGCAGGACCCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaatac > 2:920740‑M2/1‑33 (MQ=255) cACGCAGAGCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaatacc > 2:1606055‑M2/1‑32 (MQ=255) agagCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgggatccacaatcggctcaacggcaaacatgcaataaataccgttat < 2:1527591‑M2/101‑75 (MQ=255) gagCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatc < 2:241875‑M2/101‑76 (MQ=255) gCAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatctt > 1:544557‑M2/1‑24 (MQ=255) cAGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttt < 1:94907‑M2/101‑79 (MQ=255) aGGAACCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatctttt < 1:372460‑M2/101‑80 (MQ=255) aaCCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttttaat > 2:148446‑M2/1‑19 (MQ=255) aaCCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttttaat < 2:138542‑M2/101‑83 (MQ=255) aCCGATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttttaatg < 1:388047‑M2/101‑84 (MQ=255) gATAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttttaatggga > 2:1414587‑M2/1‑15 (MQ=255) aTAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttttaatgggat > 1:702522‑M2/1‑14 (MQ=255) aTAGCGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttttaatgggat > 2:1687053‑M2/1‑14 (MQ=255) cGATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttttaatgggatggaa < 2:1702687‑M2/101‑92 (MQ=255) gATAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttttaatgggatggaac > 2:1285753‑M2/1‑9 (MQ=255) aTAATGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaatcaataccgttatcttttaatgggatggaacc < 1:1128748‑M2/101‑94 (MQ=255) aTGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttttaatgggatggaaccgtc > 1:1428717‑M2/1‑5 (MQ=255) aTGGCtgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttttaatgggatggaaccatc > 1:1270056‑M2/1‑5 (MQ=255) gctgctgcgccttccgccgctttgcggatgtgatccacaatcggctcaccggcaaccatgcaataaataccgttatcttttaatgggatggaaccatccac > 2:587690‑M2/1‑2 (MQ=255) | TGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 190/6243‑6342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |