| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 156 | 1 = | 0 (0.000) | 43 (0.750) +AAGGCTGCCGCAGC |
37/172 | 0.4 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 78 | = 21310 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GGACGTTATCAGAATACCGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 78/21215‑21310 | ggACGTTATCAGAATACCGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgc < 2:1482126‑M2/101‑6 (MQ=255) gTTATCAGAATACCGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggca < 2:1681365‑M2/101‑10 (MQ=255) tCAGAATACCGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagcct > 2:96418‑M2/1‑88 (MQ=255) aGAATACCGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttg > 1:774553‑M2/1‑86 (MQ=255) aCCGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaat > 1:185448‑M2/1‑81 (MQ=255) aCCGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaat > 2:743347‑M2/1‑81 (MQ=255) aCCGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaat > 2:691641‑M2/1‑81 (MQ=255) cGGACAGGTATGTGGAGTGGCAAAGCGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGGGGCAgctgcggcagccttgaaaatgg > 1:1140810‑M2/1‑79 (MQ=255) cGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaaagg < 2:599675‑M2/101‑23 (MQ=255) ggACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggccggcttgagaaaggg < 2:640411‑M2/101‑24 (MQ=255) cAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcga > 1:770527‑M2/1‑75 (MQ=255) aGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgat < 1:281166‑M2/101‑28 (MQ=255) aGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgat > 1:1390826‑M2/1‑74 (MQ=255) ggTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatc > 2:785719‑M2/1‑73 (MQ=255) tATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccc < 1:1226335‑M2/101‑31 (MQ=255) aTGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAggtgcgggcgccttgaaaaagggcgataccc < 1:1537353‑M2/101‑32 (MQ=255) aTGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatcccc > 1:358203‑M2/1‑70 (MQ=255) gtgCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgt > 2:1572012‑M2/1‑68 (MQ=255) aGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacg > 2:1115126‑M2/1‑64 (MQ=255) aaCGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcaggcttgaaaatgggcggtccccgggacgaagagaaa < 2:1513102‑M2/101‑46 (MQ=255) aaCGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaac > 1:709553‑M2/1‑56 (MQ=255) cTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcggtccccgtgacgaagagaacgctc < 1:88531‑M2/101‑50 (MQ=255) ttattaTCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctc > 1:29522‑M2/1‑50 (MQ=255) ttattaTCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctc > 2:815971‑M2/1‑50 (MQ=255) ttattaTCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctc > 2:1256609‑M2/1‑50 (MQ=255) tattatCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcg > 1:1681371‑M2/1‑49 (MQ=255) tCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggacca > 1:668214‑M2/1‑44 (MQ=255) agagGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatgg < 1:717150‑M2/101‑62 (MQ=255) agGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcgggagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatgggt < 2:419773‑M2/101‑64 (MQ=255) gggAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctc > 2:1140742‑M2/1‑37 (MQ=255) gAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgt < 2:1386681‑M2/101‑67 (MQ=255) cTTCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaacgggcgatccccgtgacggagagaacgctctcggaccaatagctctttttcat < 1:469270‑M2/101‑73 (MQ=255) ttCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgttttgatt > 1:251632‑M2/1‑28 (MQ=255) tCGGCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgtttttcttt < 1:1084371‑M2/101‑75 (MQ=255) ggCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgttttggtttac < 1:102809‑M2/101‑77 (MQ=255) gCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgttttgatttacg > 1:1513108‑M2/1‑24 (MQ=255) gCATTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgttttgatttacg < 2:822468‑M2/101‑78 (MQ=255) aTTTACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgttttgattttcgtg < 1:27395‑M2/101‑80 (MQ=255) ttACCGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgtttttattttcgtgat < 2:636239‑M2/101‑82 (MQ=255) ccGAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgttttgatttacgtgatgag > 2:972679‑M2/1‑17 (MQ=255) gAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgttttgatttacgtggtgagct < 2:918552‑M2/101‑87 (MQ=255) gAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgttttgatttacgtgatgagct < 1:334138‑M2/101‑87 (MQ=255) gAACGTTTTGTGGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgctttgattttcgtgctgagct < 2:226264‑M2/101‑87 (MQ=255) ttttGTGGCAgctgcggcagccttgagaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgttttgatttacgtgatgagctgcatc > 1:640416‑M2/1‑10 (MQ=255) tgGCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgttttgatttacgtgatgagctgcatcatcag > 2:1599424‑M2/1‑5 (MQ=255) ggCAgctgcggcagccttgaaaatgggcgatccccgtgacgaagagaacgctctcggaccaatggctcgttttgatttacgtgatgagctgcatcatcagg > 2:640862‑M2/1‑4 (MQ=255) | GGACGTTATCAGAATACCGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 78/21215‑21310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |