New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 149 | = 9895 | 0 (0.000) | 28 (0.470) +GACGCGTCAG |
24/180 | 1.7 | 100% | intergenic (–/–) | –/– | –/– |
? | 49 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCATCAGGCATCGGAGCACAACTGCCGGATTCGGCGTGAACGCCTTATCCGA > 49/1‑56 | tgcgccggggctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGt < 2:751692‑M2/3‑1 (MQ=255) cgccggggctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCg < 2:371301‑M2/5‑1 (MQ=255) gccggggctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGc > 2:1062408‑M2/96‑101 (MQ=255) cggggctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCAt > 1:1630404‑M2/94‑101 (MQ=255) ggggctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATc < 2:1567468‑M2/9‑1 (MQ=255) gctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAgg < 2:1528531‑M2/12‑1 (MQ=255) ctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGc > 2:201886‑M2/89‑101 (MQ=255) ctgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGc > 2:801400‑M2/89‑101 (MQ=255) tgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCa < 2:1512491‑M2/14‑1 (MQ=255) tgcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCa > 2:639093‑M2/88‑101 (MQ=255) gcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCAt < 2:1704327‑M2/15‑1 (MQ=255) gcatgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCAt > 1:1242528‑M2/87‑101 (MQ=255) atgtgctgtcgtataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCg < 2:1643272‑M2/17‑1 (MQ=255) tataacgaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATaaccg < 2:154647‑M2/28‑3 (MQ=255) gaagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGAt < 1:1227039‑M2/34‑1 (MQ=255) aagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGatg > 1:1277026‑M2/67‑100 (MQ=255) aagtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGatg > 2:409750‑M2/67‑100 (MQ=255) agtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGgatgc < 1:1282804‑M2/36‑3 (MQ=255) agtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGgatgc > 1:578741‑M2/66‑99 (MQ=255) gtgccggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCg < 1:67759‑M2/37‑1 (MQ=255) ggatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTg > 2:1047378‑M2/60‑101 (MQ=255) gatgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGa > 1:1220593‑M2/59‑101 (MQ=255) tgagctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAAc > 2:1410672‑M2/57‑101 (MQ=255) agctggagttgaagattaggggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGc < 2:935097‑M2/47‑1 (MQ=255) gctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGcc < 1:1047383‑M2/48‑1 (MQ=255) ctggagttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCt > 2:1510025‑M2/53‑101 (MQ=255) ttgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCTTATCCg > 1:109896‑M2/47‑101 (MQ=255) tgaagattatgggggcgttgatgtaggcatgataagacgcgtcagCGTCGCATCAGGCATCGGTGCATAACCGCCGGATGCGGCGTGAACGCCTTATCcgg > 2:391037‑M2/46‑100 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCATCAGGCATCGGAGCACAACTGCCGGATTCGGCGTGAACGCCTTATCCGA > 49/1‑56 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |