New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 146 1 =0 (0.000)33 (0.600)
+GACTGGTATAACTCCAGC
29/164 0.7 100% intergenic (–/–) –/– –/–
?160 = 8899 0 (0.000)intergenic (–/–) –/– –/–

TAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  160/8800‑8899
                                                                                                   |                                                                                                    
tAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAg                                                                                                     <  2:616261‑M2/101‑2 (MQ=255)
  aTGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgct                                                                                                   <  1:411565‑M2/101‑4 (MQ=255)
     gCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctgga                                                                                                <  1:685912‑M2/101‑7 (MQ=255)
        aTGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagtt                                                                                             <  2:1456791‑M2/101‑10 (MQ=255)
        aTGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagtt                                                                                             <  1:260775‑M2/101‑10 (MQ=255)
        aTGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagtt                                                                                             <  2:1553386‑M2/101‑10 (MQ=255)
         tGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagtta                                                                                            <  2:454624‑M2/101‑11 (MQ=255)
         tGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGAGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggggtta                                                                                            <  2:1084443‑M2/101‑11 (MQ=255)
           gTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttata                                                                                          <  2:500888‑M2/101‑13 (MQ=255)
            ttttAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttatac                                                                                         >  2:22287‑M2/1‑88 (MQ=255)
            ttttAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttatac                                                                                         <  1:971738‑M2/101‑14 (MQ=255)
                    ccTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggc                                                                                 <  2:235945‑M2/101‑22 (MQ=255)
                     cTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggca                                                                                <  1:168714‑M2/101‑23 (MQ=255)
                      tttGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcag                                                                               >  2:389455‑M2/1‑78 (MQ=255)
                           aGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattcc                                                                          >  1:917162‑M2/1‑73 (MQ=255)
                           aGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggaagattcc                                                                          >  1:461434‑M2/1‑73 (MQ=255)
                               tACTGCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggta                                                                      >  2:1221172‑M2/1‑69 (MQ=255)
                                  ttCGGTAAAGAAGTGGGCTTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgt                                                                   >  2:1225341‑M2/1‑66 (MQ=255)
                                    cGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcg                                                                 <  1:218809‑M2/101‑38 (MQ=255)
                                      gTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggt                                                               <  2:160087‑M2/101‑40 (MQ=255)
                                         aagaagTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttg                                                            >  2:1408506‑M2/1‑59 (MQ=255)
                                          agaagTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgc                                                           >  1:1070298‑M2/1‑58 (MQ=255)
                                          agaagTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgc                                                           <  1:1672386‑M2/101‑44 (MQ=255)
                                            aagTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctc                                                         <  1:1696847‑M2/101‑46 (MQ=255)
                                                       cGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtca                                              <  2:1257929‑M2/101‑57 (MQ=255)
                                                          cGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatag                                           <  2:888340‑M2/101‑60 (MQ=255)
                                                           gTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcgg                                          <  1:1616434‑M2/101‑61 (MQ=255)
                                                            tACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggc                                         >  1:1181311‑M2/1‑40 (MQ=255)
                                                               gtgtCTGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgag                                      <  1:447617‑M2/101‑65 (MQ=255)
                                                                    tGCGGTACGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcggg                                 <  1:1572997‑M2/101‑70 (MQ=255)
                                                                          aCGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcag                           <  1:646766‑M2/101‑76 (MQ=255)
                                                                          aCGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcag                           >  1:167186‑M2/1‑26 (MQ=255)
                                                                          aCGTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcag                           >  2:411560‑M2/1‑26 (MQ=255)
                                                                            gTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcggggggcaggc                         <  2:360228‑M2/101‑78 (MQ=255)
                                                                            gTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggt                         >  2:685907‑M2/1‑24 (MQ=255)
                                                                            gTTAGACCCCCAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggt                         >  2:1528729‑M2/1‑24 (MQ=255)
                                                                                  cccccAGGCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaat                   >  2:938899‑M2/1‑18 (MQ=255)
                                                                                        ggCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaataccagt             >  2:636208‑M2/1‑12 (MQ=255)
                                                                                         gCGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaataccagtc            >  1:1243106‑M2/1‑11 (MQ=255)
                                                                                          cGATGATGTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaataccagtcg           >  1:946340‑M2/1‑10 (MQ=255)
                                                                                               atgTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgcccccggtcatcggcgaggcggggggcagggcgcaattccagtcgtcgaa      <  2:572061‑M2/101‑97 (MQ=255)
                                                                                               atgTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgacgcgggcggcaggtcgccataccagtcgtagaa      <  2:1096707‑M2/101‑97 (MQ=255)
                                                                                                tgTAgctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaataccagtcgtagaaa     <  1:233315‑M2/101‑98 (MQ=255)
                                                                                                   agctggagttataccagtcggcagattccggtacgtcggtttgctcgccccaggtcatcggcgaggcgggcggcaggtcgcaataccagtcgtagaaactt  <  1:117741‑M2/101‑101 (MQ=255)
                                                                                                   |                                                                                                    
TAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  160/8800‑8899

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.