New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 140 | 1 = | 0 (0.000) | 38 (0.580) | 31/198 | 1.3 | 100% | intergenic (–/–) | –/– | –/– |
? | 72 | = 22436 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TGCGTACCATCGACTAAAAGTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GG > 72/22337‑22438 | tGCGTACCATCGACTAAAAGTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTg < 1:779182‑M2/101‑2 (MQ=255) gTACCATCGACTAAAAGTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccg < 2:437088‑M2/101‑5 (MQ=255) aCCATCGACTAAAAGTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgcc < 1:1600318‑M2/101‑7 (MQ=255) cGACTAAAAGTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccccaac < 2:1453407‑M2/101‑12 (MQ=255) aCTAAAAGTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgt < 1:1531952‑M2/101‑14 (MQ=255) cTAAAAGTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgtt > 2:668477‑M2/1‑87 (MQ=255) aaaGTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaac > 2:1698175‑M2/1‑84 (MQ=255) gTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgc < 1:148816‑M2/101‑21 (MQ=255) acacGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatc < 2:714216‑M2/101‑27 (MQ=255) cacGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatca < 2:962089‑M2/101‑28 (MQ=255) cagcaCGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttc > 2:779177‑M2/1‑68 (MQ=255) acgCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctata > 1:1330504‑M2/1‑61 (MQ=255) cgCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatat > 2:1092216‑M2/1‑60 (MQ=255) cTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgc < 1:11742‑M2/101‑44 (MQ=255) ccGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgtta > 1:1420713‑M2/1‑54 (MQ=255) aTTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattg < 1:868028‑M2/101‑51 (MQ=255) aTTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattg < 2:614706‑M2/101‑51 (MQ=255) aTTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattg < 2:127938‑M2/101‑51 (MQ=255) tGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaacca > 2:286921‑M2/1‑44 (MQ=255) gATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttgg > 1:437093‑M2/1‑38 (MQ=255) aTGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggc < 2:921472‑M2/101‑65 (MQ=255) tGAGCGATGATTTCACGCAGATTTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggct > 2:1600312‑M2/1‑36 (MQ=255) tGAGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggct > 2:1433914‑M2/1‑36 (MQ=255) aGCGATGATTTCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcg < 1:441746‑M2/101‑68 (MQ=255) tttCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacc > 1:1394713‑M2/1‑26 (MQ=255) tttCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacc > 2:874816‑M2/1‑26 (MQ=255) ttCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaaccc > 1:1041907‑M2/1‑25 (MQ=255) ttCACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaaccc < 1:667520‑M2/101‑77 (MQ=255) cACGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacccat > 2:1415403‑M2/1‑23 (MQ=255) aCGCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacccatc > 1:326943‑M2/1‑22 (MQ=255) gCAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacccatcag < 2:1264986‑M2/101‑82 (MQ=255) cAGATGTTTGTTACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacccatcagc > 2:689444‑M2/1‑19 (MQ=255) tttttgttacTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacccatcagcgcat > 2:1273569‑M2/3‑15 (MQ=255) tgtttgttACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacccatcagcgcat > 2:1057600‑M2/1‑15 (MQ=255) tgtttgttACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacccatcagcgcat > 2:1292334‑M2/1‑15 (MQ=255) gttACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacccatcagcgcatcgcct > 2:1531946‑M2/1‑10 (MQ=255) gttACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacccatcagcgcatcgcct < 1:347111‑M2/101‑92 (MQ=255) gttACTGGCTgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacccatcagcgcatcgcct < 2:692226‑M2/101‑92 (MQ=255) tgccgccgcaacgttaactgccggatcaggcttcggctatatgcgttattgggaaccaggttggctcgaattaacccatcagcgcatcgccttttttaaag < 2:1058490‑M2/101‑101 (MQ=255) | TGCGTACCATCGACTAAAAGTATGCACACGGGCAGCACGACGCTGCCCGATTTTTTTGCAGGGATGAGCGATGATTTCACGCAGATGTTTGTTACTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GG > 72/22337‑22438 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |