| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 134 | 12638 = | 49 (0.740) | 64 (1.120) | 50/172 | 0.2 | 75.2% | intergenic (–/–) | –/– | –/– |
| ? | 50 | 15 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGG > 50/1‑115 | ccggaattctcaggagaaccccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGa < 1:887195‑M2/3‑1 (MQ=255) cggagttctcaggagaaccccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGaa < 2:1446167‑M2/4‑1 (MQ=255) cggaattctcaggagaaccccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGaa < 1:714953‑M2/4‑1 (MQ=255) ggaattctcaggagaaccccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGaaa < 1:369537‑M2/5‑1 (MQ=255) gaattctcaggagaaccccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGaaaa > 2:1359514‑M2/96‑101 (MQ=255) ctcaggagaaccccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAAtata < 1:122825‑M2/11‑1 (MQ=255) caggagaaccccgctgacccggcggcgtgcttgccgtagttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATaaa > 1:945970‑M2/89‑101 (MQ=255) ggagaaccccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATaaaaa > 2:987526‑M2/87‑101 (MQ=255) ggagaaccccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATaaaaa < 1:130620‑M2/15‑1 (MQ=255) aaccccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACttt < 1:429768‑M2/19‑1 (MQ=255) aaccccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACttt > 2:90511‑M2/83‑101 (MQ=255) acccctctggcccggcagcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTa < 2:237934‑M2/20‑1 (MQ=255) accccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTa < 1:443347‑M2/20‑1 (MQ=255) ccccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTAt < 2:1076366‑M2/21‑1 (MQ=255) cccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATc > 1:1687331‑M2/80‑101 (MQ=255) cccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATc < 2:330914‑M2/22‑1 (MQ=255) cccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATc < 1:1031323‑M2/22‑1 (MQ=255) cccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATc < 1:1318805‑M2/22‑1 (MQ=255) ccgctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCg < 2:659314‑M2/23‑1 (MQ=255) gctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGtt < 1:261951‑M2/25‑1 (MQ=255) ctgacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTc < 2:221348‑M2/26‑1 (MQ=255) gacccggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGc > 1:238862‑M2/74‑101 (MQ=255) cggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCAt < 1:496709‑M2/32‑1 (MQ=255) cggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCAt < 2:1717057‑M2/32‑1 (MQ=255) cggcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCAt < 2:1079498‑M2/32‑1 (MQ=255) gcggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCAttt < 2:926471‑M2/34‑1 (MQ=255) cggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCAtttt < 2:1262976‑M2/35‑1 (MQ=255) cggcgtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCAtttt > 1:514107‑M2/67‑101 (MQ=255) ggcgtgcttgccgttgttccgtgtcaggggtggcgcattatagggagttattacggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCAttttt > 2:260877‑M2/66‑101 (MQ=255) gtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAg > 1:1594904‑M2/63‑101 (MQ=255) gtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAg > 2:758587‑M2/63‑101 (MQ=255) gtgcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAg > 2:945410‑M2/63‑101 (MQ=255) gcttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGc > 2:527789‑M2/61‑101 (MQ=255) cttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCa > 2:1572670‑M2/60‑101 (MQ=255) gccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCaaaa < 1:937051‑M2/45‑1 (MQ=255) ccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAAc < 1:758592‑M2/46‑1 (MQ=255) gttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACAt < 2:100728‑M2/48‑1 (MQ=255) gttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACAt > 1:164013‑M2/54‑101 (MQ=255) ttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATc < 2:220366‑M2/49‑1 (MQ=255) ttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATc < 1:1065377‑M2/49‑1 (MQ=255) gttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCtt < 1:436707‑M2/51‑1 (MQ=255) ttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTa > 2:1043607‑M2/50‑101 (MQ=255) ttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTa < 1:1319257‑M2/52‑1 (MQ=255) ccgtgtcagtggtggcgcattatagggagttattccggcctgaccaaCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTaaa > 1:822394‑M2/48‑101 (MQ=255) ccgtgtcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTaaa < 2:388946‑M2/54‑1 (MQ=255) tcagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAg < 1:143705‑M2/59‑1 (MQ=255) cagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGt < 1:650765‑M2/60‑1 (MQ=255) cagtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGt > 1:1504550‑M2/42‑101 (MQ=255) gtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCt > 2:917725‑M2/40‑101 (MQ=255) gtggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCt > 1:1207356‑M2/40‑101 (MQ=255) tggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCtt > 1:1548048‑M2/39‑101 (MQ=255) ggtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCttt < 2:1595382‑M2/64‑1 (MQ=255) gtggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCtttt < 2:1633755‑M2/65‑1 (MQ=255) tggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTc < 2:1594898‑M2/66‑1 (MQ=255) ggcgcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCACATTTTTCAGGCTAACCATCTTAAAAATAGTCTTTTcc < 2:1635275‑M2/67‑1 (MQ=255) gcattatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTc > 2:1180595‑M2/32‑101 (MQ=255) attatagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTa > 2:300815‑M2/30‑101 (MQ=255) atagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACt > 1:1029775‑M2/27‑101 (MQ=255) atagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACt > 1:716894‑M2/27‑101 (MQ=255) atagggagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACt < 1:260877‑M2/75‑1 (MQ=255) gagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAg < 2:650805‑M2/80‑1 (MQ=255) gagttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAg < 2:1456772‑M2/80‑1 (MQ=255) gttattccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTTTGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGAc > 2:1438962‑M2/20‑101 (MQ=255) attccggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACaaa < 1:1453983‑M2/85‑1 (MQ=255) cggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACg < 2:1092902‑M2/89‑1 (MQ=255) ggcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGa > 1:1670802‑M2/12‑101 (MQ=255) gcctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAg > 1:897986‑M2/11‑101 (MQ=255) cctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGc < 2:107562‑M2/92‑1 (MQ=255) cctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGc < 2:1504544‑M2/92‑1 (MQ=255) ctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGcc > 1:1633652‑M2/9‑101 (MQ=255) ctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGcc > 2:1679064‑M2/9‑101 (MQ=255) ctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGcc > 1:427731‑M2/9‑101 (MQ=255) ctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGcc > 1:156911‑M2/9‑101 (MQ=255) ctgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGcc > 2:1533932‑M2/9‑101 (MQ=255) tgacaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGccc < 2:514102‑M2/94‑1 (MQ=255) acaagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCg < 1:936377‑M2/96‑1 (MQ=255) aagCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGaa > 1:303729‑M2/4‑101 (MQ=255) agCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAg < 2:945965‑M2/99‑1 (MQ=255) cGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAggg < 1:1359520/101‑1 (MQ=255) cGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAggg > 2:814297/1‑101 (MQ=255) cGAAAAATATAAAAACATTATCGTTCGCTCATTTTTCAGGGAAAACATCTTAAAAATAGTCTTTTCCGTCTAATTTATAGACAAAAACGAGCCCCGAAggg < 2:126219/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCATTTTTCAGGCAAAACATCTTAAAAATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGG > 50/1‑115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |