New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 134 | 12607 = | 76 (1.140) | 55 (0.980) | 37/168 | 0.5 | 63.3% | intergenic (–/–) | –/– | –/– |
? | 152 | = 9664 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
AAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCGCGGTCAGAAAAT > 152/9565‑9680 | aaGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAt > 1:588230‑M2/1‑100 (MQ=255) aaGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAt > 2:1560288‑M2/1‑100 (MQ=255) aaGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAt > 1:302250‑M2/1‑100 (MQ=255) aGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtg > 2:1001061‑M2/1‑99 (MQ=255) aGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtg < 2:726182‑M2/101‑3 (MQ=255) aGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtg > 1:995118‑M2/1‑99 (MQ=255) aGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAta < 2:1334353‑M2/101‑3 (MQ=255) gTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcg < 2:1098284‑M2/101‑7 (MQ=255) tataCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtc < 2:58803‑M2/101‑10 (MQ=255) ataCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtca < 1:353887‑M2/101‑11 (MQ=255) ataCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtca < 1:352787‑M2/101‑11 (MQ=255) taCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcag < 1:136871‑M2/101‑12 (MQ=255) cGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaa < 1:119377‑M2/101‑15 (MQ=255) gATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaa < 2:1442035‑M2/101‑16 (MQ=255) ggAACAGGTGGTGGATTTTCGCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattatt > 1:615006‑M2/1‑81 (MQ=255) aGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattatttt > 2:1423331‑M2/1‑79 (MQ=255) aGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattatttt > 1:589793‑M2/1‑79 (MQ=255) gCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattatttta > 2:848019‑M2/1‑78 (MQ=255) cAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaa > 1:49535‑M2/1‑77 (MQ=255) aGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaa > 2:621020‑M2/1‑76 (MQ=255) ggTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaat > 1:954572‑M2/1‑75 (MQ=255) ggTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaat > 1:490916‑M2/1‑75 (MQ=255) ggTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaat < 2:190428‑M2/101‑27 (MQ=255) ggTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaat > 2:352787‑M2/1‑75 (MQ=255) cGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcct < 2:900992‑M2/101‑32 (MQ=255) gAATTTCGCCCTAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAATCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctc > 1:1312270‑M2/1‑69 (MQ=255) gAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctc < 2:1638831‑M2/101‑33 (MQ=255) ttCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgt > 1:1501651‑M2/1‑65 (MQ=255) ttCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgt > 1:495258‑M2/1‑65 (MQ=255) cGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtca > 1:58803‑M2/1‑63 (MQ=255) ccGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggc < 1:541546‑M2/101‑42 (MQ=255) gagaAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccg > 1:228976‑M2/1‑58 (MQ=255) gagaAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccg > 1:837570‑M2/1‑58 (MQ=255) gaAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccgga < 1:409829‑M2/101‑46 (MQ=255) gaAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccgga < 2:673651‑M2/101‑46 (MQ=255) aaTCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaat > 1:1398751‑M2/1‑54 (MQ=255) aTCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaata < 2:1094553‑M2/101‑49 (MQ=255) aTCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaata > 1:1460180‑M2/1‑53 (MQ=255) aTCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaata < 1:165457‑M2/101‑49 (MQ=255) gCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataact > 2:1252858‑M2/1‑50 (MQ=255) gCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataact > 2:1547728‑M2/1‑50 (MQ=255) ccATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactcc < 1:993762‑M2/101‑54 (MQ=255) ccATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactcc < 1:571416‑M2/101‑54 (MQ=255) cATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccc > 2:1361134‑M2/1‑47 (MQ=255) aTTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccct < 1:1379743‑M2/101‑56 (MQ=255) aTTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccct < 2:1396458‑M2/101‑56 (MQ=255) ttAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctat > 2:409824‑M2/1‑44 (MQ=255) aaCCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataa < 2:1292843‑M2/101‑60 (MQ=255) aaCCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataa > 2:1102127‑M2/1‑42 (MQ=255) aCCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataat < 2:1346790‑M2/101‑61 (MQ=255) cGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgc < 2:1656085‑M2/101‑63 (MQ=255) ccGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccacca > 1:1098289‑M2/1‑32 (MQ=255) cGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccac > 1:892135‑M2/1‑31 (MQ=255) aaaTAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacgg < 2:789503‑M2/101‑79 (MQ=255) aaaTAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacgg < 2:202232‑M2/101‑79 (MQ=255) aTAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaa < 1:1384635‑M2/101‑81 (MQ=255) aaGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaaca < 1:397651‑M2/101‑83 (MQ=255) cATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacg > 2:742106‑M2/1‑16 (MQ=255) cATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacg > 2:541541‑M2/1‑16 (MQ=255) cATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacg > 2:1373178‑M2/1‑16 (MQ=255) cATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacg > 1:222848‑M2/1‑16 (MQ=255) aTAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacgg > 1:365144‑M2/1‑15 (MQ=255) aTAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacgg < 2:708301‑M2/101‑87 (MQ=255) aTAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacgg < 2:1652902‑M2/101‑87 (MQ=255) gAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacggcaaac < 2:994878‑M2/101‑92 (MQ=255) gAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacggcaaac < 2:1206037‑M2/101‑92 (MQ=255) aTAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacggcaaacag < 1:899373‑M2/101‑94 (MQ=255) aTAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacggcaaacag > 1:1638837‑M2/1‑8 (MQ=255) aTAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacggcaaacag < 2:1427755‑M2/101‑94 (MQ=255) | AAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCGCGGTCAGAAAAT > 152/9565‑9680 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |