New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 134 12607 =76 (1.140)55 (0.980) 37/168 0.5 63.3% intergenic (–/–) –/– –/–
?152 = 9664 0 (0.000)intergenic (–/–) –/– –/–

AAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCGCGGTCAGAAAAT  >  152/9565‑9680
                                                                                                   |                                                                                             
aaGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAt                                                                                              >  1:588230‑M2/1‑100 (MQ=255)
aaGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAt                                                                                              >  2:1560288‑M2/1‑100 (MQ=255)
aaGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAt                                                                                              >  1:302250‑M2/1‑100 (MQ=255)
 aGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtg                                                                                             >  2:1001061‑M2/1‑99 (MQ=255)
 aGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtg                                                                                             <  2:726182‑M2/101‑3 (MQ=255)
 aGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtg                                                                                             >  1:995118‑M2/1‑99 (MQ=255)
 aGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAta                                                                                             <  2:1334353‑M2/101‑3 (MQ=255)
     gTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcg                                                                                         <  2:1098284‑M2/101‑7 (MQ=255)
        tataCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtc                                                                                      <  2:58803‑M2/101‑10 (MQ=255)
         ataCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtca                                                                                     <  1:353887‑M2/101‑11 (MQ=255)
         ataCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtca                                                                                     <  1:352787‑M2/101‑11 (MQ=255)
          taCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcag                                                                                    <  1:136871‑M2/101‑12 (MQ=255)
             cGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaa                                                                                 <  1:119377‑M2/101‑15 (MQ=255)
              gATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaa                                                                                <  2:1442035‑M2/101‑16 (MQ=255)
                   ggAACAGGTGGTGGATTTTCGCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattatt                                                                           >  1:615006‑M2/1‑81 (MQ=255)
                     aGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattatttt                                                                         >  2:1423331‑M2/1‑79 (MQ=255)
                     aGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattatttt                                                                         >  1:589793‑M2/1‑79 (MQ=255)
                      gCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattatttta                                                                        >  2:848019‑M2/1‑78 (MQ=255)
                       cAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaa                                                                       >  1:49535‑M2/1‑77 (MQ=255)
                        aGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaa                                                                      >  2:621020‑M2/1‑76 (MQ=255)
                         ggTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaat                                                                     >  1:954572‑M2/1‑75 (MQ=255)
                         ggTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaat                                                                     >  1:490916‑M2/1‑75 (MQ=255)
                         ggTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaat                                                                     <  2:190428‑M2/101‑27 (MQ=255)
                         ggTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaat                                                                     >  2:352787‑M2/1‑75 (MQ=255)
                              cGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcct                                                                <  2:900992‑M2/101‑32 (MQ=255)
                               gAATTTCGCCCTAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAATCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctc                                                               >  1:1312270‑M2/1‑69 (MQ=255)
                               gAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctc                                                               <  2:1638831‑M2/101‑33 (MQ=255)
                                   ttCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgt                                                           >  1:1501651‑M2/1‑65 (MQ=255)
                                   ttCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgt                                                           >  1:495258‑M2/1‑65 (MQ=255)
                                     cGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtca                                                         >  1:58803‑M2/1‑63 (MQ=255)
                                        ccGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggc                                                      <  1:541546‑M2/101‑42 (MQ=255)
                                          gagaAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccg                                                    >  1:228976‑M2/1‑58 (MQ=255)
                                          gagaAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccg                                                    >  1:837570‑M2/1‑58 (MQ=255)
                                            gaAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccgga                                                  <  1:409829‑M2/101‑46 (MQ=255)
                                            gaAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccgga                                                  <  2:673651‑M2/101‑46 (MQ=255)
                                              aaTCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaat                                                >  1:1398751‑M2/1‑54 (MQ=255)
                                               aTCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaata                                               <  2:1094553‑M2/101‑49 (MQ=255)
                                               aTCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaata                                               >  1:1460180‑M2/1‑53 (MQ=255)
                                               aTCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaata                                               <  1:165457‑M2/101‑49 (MQ=255)
                                                  gCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataact                                            >  2:1252858‑M2/1‑50 (MQ=255)
                                                  gCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataact                                            >  2:1547728‑M2/1‑50 (MQ=255)
                                                    ccATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactcc                                          <  1:993762‑M2/101‑54 (MQ=255)
                                                    ccATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactcc                                          <  1:571416‑M2/101‑54 (MQ=255)
                                                     cATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccc                                         >  2:1361134‑M2/1‑47 (MQ=255)
                                                      aTTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccct                                        <  1:1379743‑M2/101‑56 (MQ=255)
                                                      aTTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccct                                        <  2:1396458‑M2/101‑56 (MQ=255)
                                                        ttAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctat                                      >  2:409824‑M2/1‑44 (MQ=255)
                                                          aaCCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataa                                    <  2:1292843‑M2/101‑60 (MQ=255)
                                                          aaCCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataa                                    >  2:1102127‑M2/1‑42 (MQ=255)
                                                           aCCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataat                                   <  2:1346790‑M2/101‑61 (MQ=255)
                                                             cGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgc                                 <  2:1656085‑M2/101‑63 (MQ=255)
                                                                    ccGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccacca                          >  1:1098289‑M2/1‑32 (MQ=255)
                                                                     cGACGCTGAAATAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccac                         >  1:892135‑M2/1‑31 (MQ=255)
                                                                             aaaTAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacgg                 <  2:789503‑M2/101‑79 (MQ=255)
                                                                             aaaTAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacgg                 <  2:202232‑M2/101‑79 (MQ=255)
                                                                               aTAAGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaa               <  1:1384635‑M2/101‑81 (MQ=255)
                                                                                 aaGCATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaaca             <  1:397651‑M2/101‑83 (MQ=255)
                                                                                    cATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacg          >  2:742106‑M2/1‑16 (MQ=255)
                                                                                    cATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacg          >  2:541541‑M2/1‑16 (MQ=255)
                                                                                    cATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacg          >  2:1373178‑M2/1‑16 (MQ=255)
                                                                                    cATAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacg          >  1:222848‑M2/1‑16 (MQ=255)
                                                                                     aTAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacgg         >  1:365144‑M2/1‑15 (MQ=255)
                                                                                     aTAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacgg         <  2:708301‑M2/101‑87 (MQ=255)
                                                                                     aTAAAGAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacgg         <  2:1652902‑M2/101‑87 (MQ=255)
                                                                                          gAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacggcaaac    <  2:994878‑M2/101‑92 (MQ=255)
                                                                                          gAATAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacggcaaac    <  2:1206037‑M2/101‑92 (MQ=255)
                                                                                            aTAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacggcaaacag  <  1:899373‑M2/101‑94 (MQ=255)
                                                                                            aTAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacggcaaacag  >  1:1638837‑M2/1‑8 (MQ=255)
                                                                                            aTAAAAAAtgcgcggtcagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccactgacacggaacaacggcaaacag  <  2:1427755‑M2/101‑94 (MQ=255)
                                                                                                   |                                                                                             
AAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCGCGGTCAGAAAAT  >  152/9565‑9680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.