New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 134 1 =0 (0.000)54 (0.810) 47/200 0.0 100% intergenic (–/–) –/– –/–
?51 = 15566 0 (0.000)intergenic (–/–) –/– –/–

TGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTCAAC  >  51/15466‑15664
                                                                                                    |                                                                                                  
tgtAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTAc                                                                                                    >  2:1539247/1‑101 (MQ=255)
gtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagcgcaccaccGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTAc                                                                                                    >  1:224477‑M2/68‑101 (MQ=255)
gtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagcgcaccaccGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTAc                                                                                                    >  2:632082‑M2/68‑101 (MQ=255)
 taaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcatcgcaccaccGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTacg                                                                                                   <  2:787602‑M2/35‑2 (MQ=255)
 taaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagcgcaccaccGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTacg                                                                                                   >  2:11031‑M2/67‑100 (MQ=255)
  tAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgt                                                                                                  <  2:363509‑M2/101‑3 (MQ=255)
   aagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagcgcaccaccGCCGGATGCGGCGCGAGCGCCTTATCCGGCctacgaa                                                                                                 >  1:96728‑M2/65‑98 (MQ=255)
   aGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgtt                                                                                                 >  2:353710‑M2/1‑98 (MQ=255)
     gcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagcgccccaccGCCGGATGCGGCGCGAGCGCCTTATCCGgcctacgaatc                                                                                               <  1:283232‑M2/39‑6 (MQ=255)
     gTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgtttt                                                                                               >  2:1093430‑M2/1‑96 (MQ=255)
      cgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagcgcaccaccGCCGGATGCGGCGCGAGCGCCTTATCCggcctacgaatcg                                                                                              >  1:1213838‑M2/62‑95 (MQ=255)
        tgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagcgcaccaccGCCGGATGCGGCGCGAGCGCCTTATccggcctacgaatcggc                                                                                            <  1:319740‑M2/42‑9 (MQ=255)
        ggATAAGATGCGCAAGCATCTCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaat                                                                                            >  1:59429‑M2/1‑93 (MQ=255)
        ggATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaat                                                                                            >  2:362484‑M2/1‑93 (MQ=255)
         gATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatg                                                                                           >  2:1465974‑M2/1‑92 (MQ=255)
         gATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatg                                                                                           >  2:1067426‑M2/1‑92 (MQ=255)
          ctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagcgcaccaccGCCGGATGCGGCGCGAGCGCCTTatccggcctacgaatcggcat                                                                                          <  1:1144157‑M2/44‑11 (MQ=255)
          ctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagcgcaccaccGCCGGATGCGGCGCGAGCGCCTTatccggcctacgaatcggcat                                                                                          <  1:617435‑M2/44‑11 (MQ=255)
          ctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagcgcaccaccGCCGGATGCGGCGCGAGCGCCTTatccggcctacgaatcggcat                                                                                          <  1:348048‑M2/44‑11 (MQ=255)
          aTAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgc                                                                                          <  2:839361‑M2/101‑11 (MQ=255)
             aGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccag                                                                                       >  2:929622‑M2/1‑88 (MQ=255)
             aGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccag                                                                                       >  2:701295‑M2/1‑88 (MQ=255)
                   gcAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaa                                                                                 >  1:181240‑M2/1‑82 (MQ=255)
                     aaGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatg                                                                               <  2:1367043‑M2/101‑22 (MQ=255)
                      aGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatgg                                                                              <  2:912890‑M2/101‑23 (MQ=255)
                       gcatcgcatcCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggt                                                                             <  1:734737‑M2/101‑24 (MQ=255)
                          tcgcatcCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaa                                                                          <  1:364445‑M2/101‑27 (MQ=255)
                           cgcatcCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaat                                                                         >  1:939807‑M2/1‑74 (MQ=255)
                              atcCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattac                                                                      <  2:1148283‑M2/101‑31 (MQ=255)
                               tcCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacc                                                                     >  1:315078‑M2/1‑70 (MQ=255)
                                ccGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacct                                                                    <  1:1172752‑M2/101‑33 (MQ=255)
                                  gACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctgg                                                                  <  2:1365971‑M2/101‑35 (MQ=255)
                                   aCATTATTGCGGCACAGGTGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctgga                                                                 >  1:953736‑M2/1‑66 (MQ=255)
                                   aCATTATTGCGGCACAGGAGTTTGGCAACGGTGCGGGATGCGGGGCGAGCGCCTTATCCGGCTTACgttttaatgccagcaaaaatggtgaattacctgga                                                                 >  1:1187234‑M2/1‑66 (MQ=255)
                                     attattGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggata                                                               <  2:1472331‑M2/101‑38 (MQ=255)
                                     attattGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggata                                                               <  1:396934‑M2/101‑38 (MQ=255)
                                      ttattGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataa                                                              >  2:942066‑M2/1‑63 (MQ=255)
                                       tattGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataat                                                             >  2:628742‑M2/1‑62 (MQ=255)
                                         ttGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatca                                                           >  2:935080‑M2/1‑60 (MQ=255)
                                         ttGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatca                                                           >  1:112606‑M2/1‑60 (MQ=255)
                                          tGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaa                                                          <  1:829724‑M2/101‑43 (MQ=255)
                                           gCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaac                                                         >  1:1367049‑M2/1‑58 (MQ=255)
                                            cGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaact                                                        <  2:1155330‑M2/101‑45 (MQ=255)
                                             ggCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactc                                                       >  1:870010‑M2/1‑56 (MQ=255)
                                              gCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactca                                                      >  1:261489‑M2/1‑55 (MQ=255)
                                                 caGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgg                                                   >  1:1414812‑M2/1‑52 (MQ=255)
                                                     aGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgg                                               >  1:721424‑M2/1‑48 (MQ=255)
                                                      gTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtggg                                              <  2:853982‑M2/101‑55 (MQ=255)
                                                      gTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtggg                                              >  2:1231584‑M2/1‑47 (MQ=255)
                                                        ttGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtt                                            >  1:569410‑M2/1‑45 (MQ=255)
                                                         tGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggttt                                           >  2:549332‑M2/1‑44 (MQ=255)
                                                         tGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggttt                                           <  1:810819‑M2/101‑58 (MQ=255)
                                                          ggCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggttta                                          <  1:560897‑M2/101‑59 (MQ=255)
                                                           gCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaa                                         >  1:912895‑M2/1‑42 (MQ=255)
                                                            cAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaat                                        >  1:1577669‑M2/1‑41 (MQ=255)
                                                            cAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaat                                        >  1:1169863‑M2/1‑41 (MQ=255)
                                                             aaCGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaata                                       <  1:1243417‑M2/101‑62 (MQ=255)
                                                             aaCGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaata                                       >  1:325444‑M2/1‑40 (MQ=255)
                                                               cGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaataaa                                     >  2:974651‑M2/1‑38 (MQ=255)
                                                                     cGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaataaaccgcgt                               >  1:930527‑M2/1‑32 (MQ=255)
                                                                      ggATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaataaaccgcgtc                              <  1:1459908‑M2/101‑71 (MQ=255)
                                                                       gATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaataaaccgcgtct                             >  1:363509‑M2/1‑30 (MQ=255)
                                                                             gcgcGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaataaaccgcgtctccagat                       >  1:285396‑M2/1‑24 (MQ=255)
                                                                                cgAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaataaaccgcgtctccagatatt                    >  1:1276861‑M2/1‑21 (MQ=255)
                                                                                                  tACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaataaaccgcgtctccagatattcatcaggctgatgagctt  >  2:364445‑M2/1‑3 (MQ=255)
                                                                                                  tACgttttaatgccagcaaaaatggtgaattacctggataatcaactcacgggtgggtttaataaaccgcgtctccagatattcatcaggctgatgagctt  <  2:1612833‑M2/101‑99 (MQ=255)
                                                                                                    |                                                                                                  
TGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTCAAC  >  51/15466‑15664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.