| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 131 | = 8478 | 73 (1.100) | 42 (0.630) | 25/200 | 2.6 | 53.5% | intergenic (–/–) | –/– | –/– |
| ? | 45 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGAAGTGCAT > 45/1‑100 | tcaccctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGAt < 1:349804‑M2/66‑1 (MQ=255)tcaccctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGAt > 1:172264‑M2/36‑101 (MQ=255) accctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATcc > 1:540887‑M2/34‑101 (MQ=255) accctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATcc < 1:1243231‑M2/68‑1 (MQ=255) accctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATcc < 2:616612‑M2/68‑1 (MQ=255) ccctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCg < 1:849267‑M2/69‑1 (MQ=255) cctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCgg < 2:1324329‑M2/70‑1 (MQ=255) cctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCgg < 1:1373906‑M2/70‑1 (MQ=255) cctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCgg > 2:313931‑M2/32‑101 (MQ=255) cctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCgg > 2:1528830‑M2/32‑101 (MQ=255) ctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAATACTATGACGGATGCGGCGTGAACGCCTGATCCGGc > 1:1046698‑M2/31‑101 (MQ=255) ctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGc > 2:1401499‑M2/31‑101 (MQ=255) ctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGc > 2:1243690‑M2/31‑101 (MQ=255) ctaaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGc < 2:1439067‑M2/71‑1 (MQ=255) aaccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCt < 1:1531945‑M2/73‑1 (MQ=255) ccctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTAc > 2:1216207‑M2/27‑101 (MQ=255) cctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACg > 1:53620‑M2/26‑101 (MQ=255) cctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACg > 2:1329051‑M2/26‑101 (MQ=255) cctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACg > 2:800526‑M2/26‑101 (MQ=255) ctctccccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACgg > 1:570303‑M2/25‑101 (MQ=255) tccccagaggggcgaggggacCGACCGAGCGTCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTaa < 1:884065‑M2/80‑1 (MQ=255) cccagaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGc < 2:425531‑M2/82‑1 (MQ=255) cagaggggcgagggggcCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCAGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCt > 2:1111583‑M2/18‑101 (MQ=255) agaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTg > 1:325959‑M2/17‑101 (MQ=255) agaggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTg > 2:1496738‑M2/17‑101 (MQ=255) aggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGAt > 2:1156212‑M2/15‑101 (MQ=255) ggggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGAtt > 2:483640‑M2/14‑101 (MQ=255) gggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTc < 1:921492‑M2/89‑1 (MQ=255) ggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTcg > 2:1022376‑M2/12‑101 (MQ=255) ggcgaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTcg < 2:342694‑M2/90‑1 (MQ=255) gaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGTCCTACGGTAAGCCTGATTCGCGa > 1:906464‑M2/9‑101 (MQ=255) gaggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGCTAAGCCTGATTCGCGa > 1:949398‑M2/9‑101 (MQ=255) aggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGaa > 2:758550‑M2/8‑101 (MQ=255) ggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGAAg < 2:172264‑M2/95‑1 (MQ=255) ggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGAAg < 1:622658‑M2/95‑1 (MQ=255) ggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGAAg < 2:886575‑M2/95‑1 (MQ=255) ggggacCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGAAg < 1:1158938‑M2/95‑1 (MQ=255) ggacCGACCGAGCGCCTTTTTGACTCTGTACGCGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGAAGTg < 2:539104‑M2/97‑1 (MQ=255) cCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGAAGtgccg > 2:871067‑M2/2‑99 (MQ=255) cCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGAAGTGCAt > 2:1261070‑M2/2‑101 (MQ=255) cCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGAAGTGCAt > 2:643947‑M2/2‑101 (MQ=255) cCGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGAAGTGCAt > 1:1017012‑M2/2‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGACCGAGCGCCTTTTTGACTCTGTACACGGTTAACACTTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGTAAGCCTGATTCGCGAAGTGCAT > 45/1‑100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |