New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 125 | = 13803 | 0 (0.000) | 50 (0.820) | 35/182 | 1.0 | 100% | intergenic (–/–) | –/– | –/– |
? | 17 | = 46857 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
GCTCATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGATAAG > 17/46759‑46866 | gCTCATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGcc > 1:523198‑M2/1‑99 (MQ=255) gCTCATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGcc > 1:1184353‑M2/1‑99 (MQ=255) cATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccgga < 1:897176‑M2/101‑6 (MQ=255) cATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccgga < 1:699267‑M2/101‑6 (MQ=255) aTTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggat > 1:1317083‑M2/1‑95 (MQ=255) tAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataa < 2:514949‑M2/101‑9 (MQ=255) tAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataa > 1:168196‑M2/1‑93 (MQ=255) aTGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataagg > 2:1351365‑M2/1‑91 (MQ=255) tGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggc > 2:331648‑M2/1‑90 (MQ=255) gTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcg < 1:521507‑M2/101‑13 (MQ=255) tACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgt < 1:397718‑M2/101‑14 (MQ=255) aCTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgtt < 1:1157207‑M2/101‑15 (MQ=255) aCTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgtt < 1:1447581‑M2/101‑15 (MQ=255) aCTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgtt < 1:1661221‑M2/101‑15 (MQ=255) cTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttc > 1:52005‑M2/1‑86 (MQ=255) cTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttc > 1:667068‑M2/1‑86 (MQ=255) tCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttca < 2:1641308‑M2/101‑17 (MQ=255) cGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcac > 1:828253‑M2/1‑84 (MQ=255) gttgttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacg > 2:758573‑M2/1‑83 (MQ=255) ttgttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgc < 1:602935‑M2/101‑20 (MQ=255) tgttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgcc < 1:1242113‑M2/101‑21 (MQ=255) gttTACGTTTTGCCTGATGCACTTCGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTATGccggataaggcgttcacgccg > 1:1113933‑M2/1‑80 (MQ=255) gttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccg < 1:1277983‑M2/101‑22 (MQ=255) gttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccg < 2:1357179‑M2/101‑22 (MQ=255) gttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccg < 1:1230625‑M2/101‑22 (MQ=255) tttACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgc < 2:1515768‑M2/101‑23 (MQ=255) tttACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgc < 2:1150594‑M2/101‑23 (MQ=255) ttACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgca > 2:1241787‑M2/1‑78 (MQ=255) cGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatcc > 2:1166848‑M2/1‑75 (MQ=255) cGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatcc > 1:1354989‑M2/1‑75 (MQ=255) cGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatcc > 1:1654049‑M2/1‑75 (MQ=255) gTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccg < 1:1347955‑M2/101‑28 (MQ=255) ttttGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccgg > 2:51382‑M2/1‑73 (MQ=255) tGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcat > 2:1578105‑M2/1‑70 (MQ=255) ccTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatga > 2:761788‑M2/1‑68 (MQ=255) ccTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatga < 1:313880‑M2/101‑34 (MQ=255) cTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaa > 2:994478‑M2/1‑67 (MQ=255) cTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaa < 1:421631‑M2/101‑35 (MQ=255) cTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaa < 2:1586387‑M2/101‑35 (MQ=255) tGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaac < 1:376647‑M2/101‑36 (MQ=255) gATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaaca > 2:521502‑M2/1‑65 (MQ=255) gATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaaca < 1:409810‑M2/101‑37 (MQ=255) gATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaaca > 2:184982‑M2/1‑65 (MQ=255) gATGCACTACGTGTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaaca > 1:503988‑M2/1‑65 (MQ=255) aTGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaa < 1:1484479‑M2/101‑38 (MQ=255) gCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaag < 1:591390‑M2/101‑40 (MQ=255) gCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaag > 1:249708‑M2/1‑62 (MQ=255) aCTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcg > 2:895040‑M2/1‑60 (MQ=255) aCTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcg > 1:1329982‑M2/1‑60 (MQ=255) aCGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcat > 2:576602‑M2/1‑57 (MQ=255) aCGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcat < 2:1268667‑M2/101‑45 (MQ=255) ttATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttg < 1:1027415‑M2/101‑49 (MQ=255) tCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttgtca > 2:258488‑M2/1‑50 (MQ=255) ccGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttgtcag > 2:610458‑M2/1‑49 (MQ=255) tACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttgtcagcaatct > 2:1632642‑M2/1‑43 (MQ=255) tcaTGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttgtcagcaatcta > 1:279200‑M2/2‑42 (MQ=255) aCATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttgtcagcaatcta < 1:1236495‑M2/101‑60 (MQ=255) | GCTCATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGATAAG > 17/46759‑46866 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |