New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 125 = 138030 (0.000)50 (0.820) 35/182 1.0 100% intergenic (–/–) –/– –/–
?17 = 46857 0 (0.000)intergenic (–/–) –/– –/–

GCTCATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGATAAG  >  17/46759‑46866
                                                                                                  |                                                           
gCTCATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGcc                                                           >  1:523198‑M2/1‑99 (MQ=255)
gCTCATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGcc                                                           >  1:1184353‑M2/1‑99 (MQ=255)
   cATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccgga                                                        <  1:897176‑M2/101‑6 (MQ=255)
   cATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccgga                                                        <  1:699267‑M2/101‑6 (MQ=255)
    aTTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggat                                                       >  1:1317083‑M2/1‑95 (MQ=255)
      tAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataa                                                     <  2:514949‑M2/101‑9 (MQ=255)
      tAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataa                                                     >  1:168196‑M2/1‑93 (MQ=255)
        aTGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataagg                                                   >  2:1351365‑M2/1‑91 (MQ=255)
         tGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggc                                                  >  2:331648‑M2/1‑90 (MQ=255)
          gTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcg                                                 <  1:521507‑M2/101‑13 (MQ=255)
           tACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgt                                                <  1:397718‑M2/101‑14 (MQ=255)
            aCTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgtt                                               <  1:1157207‑M2/101‑15 (MQ=255)
            aCTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgtt                                               <  1:1447581‑M2/101‑15 (MQ=255)
            aCTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgtt                                               <  1:1661221‑M2/101‑15 (MQ=255)
             cTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttc                                              >  1:52005‑M2/1‑86 (MQ=255)
             cTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttc                                              >  1:667068‑M2/1‑86 (MQ=255)
              tCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttca                                             <  2:1641308‑M2/101‑17 (MQ=255)
               cGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcac                                            >  1:828253‑M2/1‑84 (MQ=255)
                gttgttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacg                                           >  2:758573‑M2/1‑83 (MQ=255)
                 ttgttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgc                                          <  1:602935‑M2/101‑20 (MQ=255)
                  tgttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgcc                                         <  1:1242113‑M2/101‑21 (MQ=255)
                   gttTACGTTTTGCCTGATGCACTTCGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTATGccggataaggcgttcacgccg                                        >  1:1113933‑M2/1‑80 (MQ=255)
                   gttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccg                                        <  1:1277983‑M2/101‑22 (MQ=255)
                   gttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccg                                        <  2:1357179‑M2/101‑22 (MQ=255)
                   gttTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccg                                        <  1:1230625‑M2/101‑22 (MQ=255)
                    tttACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgc                                       <  2:1515768‑M2/101‑23 (MQ=255)
                    tttACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgc                                       <  2:1150594‑M2/101‑23 (MQ=255)
                     ttACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgca                                      >  2:1241787‑M2/1‑78 (MQ=255)
                        cGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatcc                                   >  2:1166848‑M2/1‑75 (MQ=255)
                        cGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatcc                                   >  1:1354989‑M2/1‑75 (MQ=255)
                        cGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatcc                                   >  1:1654049‑M2/1‑75 (MQ=255)
                         gTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccg                                  <  1:1347955‑M2/101‑28 (MQ=255)
                          ttttGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccgg                                 >  2:51382‑M2/1‑73 (MQ=255)
                             tGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcat                              >  2:1578105‑M2/1‑70 (MQ=255)
                               ccTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatga                            >  2:761788‑M2/1‑68 (MQ=255)
                               ccTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatga                            <  1:313880‑M2/101‑34 (MQ=255)
                                cTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaa                           >  2:994478‑M2/1‑67 (MQ=255)
                                cTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaa                           <  1:421631‑M2/101‑35 (MQ=255)
                                cTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaa                           <  2:1586387‑M2/101‑35 (MQ=255)
                                 tGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaac                          <  1:376647‑M2/101‑36 (MQ=255)
                                  gATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaaca                         >  2:521502‑M2/1‑65 (MQ=255)
                                  gATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaaca                         <  1:409810‑M2/101‑37 (MQ=255)
                                  gATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaaca                         >  2:184982‑M2/1‑65 (MQ=255)
                                  gATGCACTACGTGTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaaca                         >  1:503988‑M2/1‑65 (MQ=255)
                                   aTGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaa                        <  1:1484479‑M2/101‑38 (MQ=255)
                                     gCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaag                      <  1:591390‑M2/101‑40 (MQ=255)
                                     gCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaag                      >  1:249708‑M2/1‑62 (MQ=255)
                                       aCTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcg                    >  2:895040‑M2/1‑60 (MQ=255)
                                       aCTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcg                    >  1:1329982‑M2/1‑60 (MQ=255)
                                          aCGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcat                 >  2:576602‑M2/1‑57 (MQ=255)
                                          aCGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcat                 <  2:1268667‑M2/101‑45 (MQ=255)
                                              ttATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttg             <  1:1027415‑M2/101‑49 (MQ=255)
                                                 tCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttgtca          >  2:258488‑M2/1‑50 (MQ=255)
                                                  ccGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttgtcag         >  2:610458‑M2/1‑49 (MQ=255)
                                                        tACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttgtcagcaatct   >  2:1632642‑M2/1‑43 (MQ=255)
                                                         tcaTGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttgtcagcaatcta  >  1:279200‑M2/2‑42 (MQ=255)
                                                         aCATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGGccggataaggcgttcacgccgcatccggcatgaacaaagcgcattttgtcagcaatcta  <  1:1236495‑M2/101‑60 (MQ=255)
                                                                                                  |                                                           
GCTCATTAATGTACTCGTTGTTTACGTTTTGCCTGATGCACTACGTTTATCCGGCCTACATGATCTCTGCAATATATTGAATTTGCGTGATTATGTAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGATAAG  >  17/46759‑46866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.