| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 118 | = 14204 | 0 (0.000) | 56 (1.090) +ATGCCTGATGCGACGCTGGCGCG |
44/154 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 154 | = 9582 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GGTGATGATTAAGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 154/9482‑9582 | ggTGATGATTAAGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGa < 1:79571/101‑1 (MQ=255) gTGATGATTAAGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAc > 1:23195‑M2/1‑100 (MQ=255) tgatgaTTAAGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcg > 1:1584829‑M2/1‑99 (MQ=255) tgatgaTTAAGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcg < 2:1557321‑M2/101‑3 (MQ=255) tgatgaTTAAGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcg < 1:94641‑M2/101‑3 (MQ=255) atgatTAAGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcg < 1:843221‑M2/101‑5 (MQ=255) tgatTAAGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgc < 2:1129906‑M2/101‑6 (MQ=255) aGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgt < 1:1324102‑M2/101‑12 (MQ=255) aGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgt < 1:697494‑M2/101‑12 (MQ=255) aGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgt < 2:1389518‑M2/101‑12 (MQ=255) gATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtc > 2:501864‑M2/1‑89 (MQ=255) gAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcat < 2:1467051‑M2/101‑17 (MQ=255) aTCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTCGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcag < 2:130300‑M2/101‑20 (MQ=255) aataGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattg < 1:946739‑M2/101‑26 (MQ=255) aataGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattg < 1:1567045‑M2/101‑26 (MQ=255) taGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtg > 1:1718165‑M2/1‑74 (MQ=255) cGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcac > 2:913771‑M2/1‑71 (MQ=255) cGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcac < 2:1310786‑M2/101‑31 (MQ=255) ttGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacg < 2:1432526‑M2/101‑37 (MQ=255) tgatgaATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacgg < 2:1021384‑M2/101‑38 (MQ=255) tgatgaATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacgg < 2:1670596‑M2/101‑38 (MQ=255) aaTATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggat > 2:843216‑M2/1‑59 (MQ=255) aaTATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggat > 1:1124445‑M2/1‑59 (MQ=255) atatGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatg < 1:375230‑M2/101‑44 (MQ=255) tatGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgc > 1:337340‑M2/1‑57 (MQ=255) atGGGATGAAAGATAGNNNNTNGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcg > 2:326103‑M2/1‑56 (MQ=255) tGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcgg < 1:612241‑M2/101‑47 (MQ=255) aTGAAAGATAGGTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaa < 1:850554‑M2/101‑51 (MQ=255) tGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaa > 1:375315‑M2/1‑50 (MQ=255) gAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaa < 2:579923‑M2/101‑53 (MQ=255) cttccgatcttgttgaaATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaac > 1:463652‑M2/9‑48 (MQ=255) aaGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacg < 1:663737‑M2/101‑55 (MQ=255) aaGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacg < 2:330585‑M2/101‑55 (MQ=255) aGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggaggcggggaaaacgcctca < 2:1506482‑M2/101‑60 (MQ=255) cTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatc < 2:1234633‑M2/101‑62 (MQ=255) ttgttgAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgcaaacgccttatcc < 1:620888‑M2/101‑63 (MQ=255) ttgttgAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatcc > 2:223055‑M2/1‑39 (MQ=255) tgttgAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccg < 1:855880‑M2/101‑64 (MQ=255) tgttgAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacagatcggaag < 2:463647‑M2/101‑64 (MQ=255) tgAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgcca > 1:1195313‑M2/1‑35 (MQ=255) gAAATGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccat > 2:396852‑M2/1‑34 (MQ=255) aaaTGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgcccta < 2:1441358‑M2/101‑69 (MQ=255) aaaTGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccata > 2:1150936‑M2/1‑33 (MQ=255) aaaTGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccata < 2:908601‑M2/101‑69 (MQ=255) aaTGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatac > 1:1557327‑M2/1‑32 (MQ=255) aTGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacg < 2:1677888‑M2/101‑71 (MQ=255) aTGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacg < 2:1309381‑M2/101‑71 (MQ=255) aTGTGCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacg < 2:1439582‑M2/101‑71 (MQ=255) gtgCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacgga < 1:1369078‑M2/101‑73 (MQ=255) gCGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaat > 2:1373504‑M2/1‑27 (MQ=255) cGATGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatg > 1:649155‑M2/1‑26 (MQ=255) aTGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgag < 1:541970‑M2/101‑78 (MQ=255) aTGTGGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgag < 2:1660936‑M2/101‑78 (MQ=255) tgGTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgt > 1:797379‑M2/1‑21 (MQ=255) ggTTTGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgta > 1:1021389‑M2/1‑20 (MQ=255) tttGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtatt > 2:990167‑M2/1‑18 (MQ=255) ttGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattt > 1:1081046‑M2/1‑17 (MQ=255) tGTAGGCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtatttt < 2:1174236‑M2/101‑86 (MQ=255) ggCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattttgtag > 2:1354820‑M2/1‑12 (MQ=255) ggCATGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattttgtag > 1:1188386‑M2/1‑12 (MQ=255) aTGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattttgtaggca > 1:74314‑M2/1‑9 (MQ=255) tGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattttgtaggcat > 1:1239274‑M2/1‑8 (MQ=255) tGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattttgtaggcat < 1:194626‑M2/101‑94 (MQ=255) tGATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattttgtaggcat > 2:946734‑M2/1‑8 (MQ=255) gATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattttgtaggcatg < 1:1521036‑M2/101‑95 (MQ=255) gATAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattttgtaggcatg > 1:1129911‑M2/1‑7 (MQ=255) tAAGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattttgtaggcatgat > 1:1660942‑M2/1‑5 (MQ=255) aaGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattttgtaggcatgata < 1:331449‑M2/101‑98 (MQ=255) aGAcgcgccagcgtcgcatcaggcattgtgcacagaacggcggatgcggcgaaaacgccttatccgccatacggaatgagtgtattttgtaggcatgataa > 2:501184‑M2/1‑3 (MQ=255) | GGTGATGATTAAGATGGAAATCAATAATAGCGGATGTTGATGAATATGGGATGAAAGATAGCTTGTTGAAATGTGCGATGTGGTTTGTAGGCATGATAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 154/9482‑9582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |