New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 117 = 143610 (0.000)55 (1.130)
+TGCCGGATGCGGCGTGAACGCCTTATC
38/146 0.1 100% intergenic (–/–) –/– –/–
?28 = 36827 0 (0.000)intergenic (–/–) –/– –/–

GGCGCTGAGGTTATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  28/36728‑36827
                                                                                                    |                                                                                                    
ggCGCTGAGGTTATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGg                                                                                                     >  2:1460225‑M2/1‑100 (MQ=255)
    gtgAGGTTATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataa                                                                                                 <  1:1113561‑M2/100‑6 (MQ=255)
    cTGAGGTTATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataa                                                                                                 <  2:474164‑M2/101‑6 (MQ=255)
    cTGAGGTTATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataa                                                                                                 <  1:952649‑M2/101‑6 (MQ=255)
      gAGGTTATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataagg                                                                                               >  1:1619413‑M2/1‑94 (MQ=255)
      gAGGTTATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataagg                                                                                               >  2:1236485‑M2/1‑94 (MQ=255)
       aGGTTATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggc                                                                                              >  1:987406‑M2/1‑93 (MQ=255)
          ttATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgtt                                                                                           <  1:85239‑M2/101‑12 (MQ=255)
           tATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttc                                                                                          >  1:511654‑M2/1‑89 (MQ=255)
           tATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttc                                                                                          >  2:1667830‑M2/1‑89 (MQ=255)
             tGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcac                                                                                        >  2:606820‑M2/1‑87 (MQ=255)
             tGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcac                                                                                        >  1:512320‑M2/1‑87 (MQ=255)
              gCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacg                                                                                       <  2:472123‑M2/101‑16 (MQ=255)
                aaaCGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacgcc                                                                                     >  2:443820‑M2/1‑84 (MQ=255)
                     tAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacgccgcatc                                                                                <  1:818249‑M2/101‑23 (MQ=255)
                      aaaaCTGCCTGATGCGCTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatcc                                                                               >  2:1367221‑M2/1‑78 (MQ=255)
                      aaaaCTGCCTGACGCGCTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatcc                                                                               >  1:254178‑M2/1‑78 (MQ=255)
                      aaaGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacgccgcatcc                                                                               >  2:1514431‑M2/1‑78 (MQ=255)
                       aaGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacgccgcatccg                                                                              <  1:1489862‑M2/101‑25 (MQ=255)
                           tctctgaTGCGCTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcat                                                                          >  2:242452‑M2/4‑73 (MQ=255)
                           tGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacgccgcatccggcag                                                                          <  2:119850‑M2/101‑29 (MQ=255)
                           tGCCTGATGCGCTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcat                                                                          >  2:1586640‑M2/1‑73 (MQ=255)
                           tGCCTGATGCGCTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcat                                                                          <  2:915584‑M2/101‑29 (MQ=255)
                           agcCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGgataaggcgttcacgccgcatccggcatg                                                                         >  1:1044999‑M2/2‑72 (MQ=255)
                            gCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacgccgcatccggcagg                                                                         <  2:1001565‑M2/101‑30 (MQ=255)
                             ccTGATGCGCTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatga                                                                        <  1:79016‑M2/101‑31 (MQ=255)
                               tGATGCGCTATGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaac                                                                      <  1:858175‑M2/101‑33 (MQ=255)
                               tGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacgccgcatccggcagtaat                                                                      >  1:489544‑M2/1‑69 (MQ=255)
                               tGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacgccgcatccggcagtaat                                                                      <  2:769530‑M2/101‑33 (MQ=255)
                                gATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacgccgcatccggcagtaata                                                                     <  2:1622075‑M2/101‑34 (MQ=255)
                                gATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacgccgcatccggcagtaata                                                                     >  2:785037‑M2/1‑68 (MQ=255)
                                 aTGCGCTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacga                                                                    <  2:1081866‑M2/101‑35 (MQ=255)
                                 aTGCGCTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacga                                                                    <  2:1050774‑M2/101‑35 (MQ=255)
                                    cgcTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCGgataaggcgttcacgccgcatccggcagtaataccag                                                                 >  2:485504‑M2/1‑64 (MQ=255)
                                    cgcTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgc                                                                 <  1:1715238‑M2/101‑38 (MQ=255)
                                     gcTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcg                                                                <  1:483420‑M2/101‑39 (MQ=255)
                                     gcTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcg                                                                >  1:505170‑M2/1‑63 (MQ=255)
                                      cTACGCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgc                                                               <  2:394272‑M2/101‑40 (MQ=255)
                                        acgctTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcac                                                             <  2:525204‑M2/99‑42 (MQ=255)
                                          gCTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactt                                                           >  2:215615‑M2/1‑58 (MQ=255)
                                           cTTATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcacttt                                                          <  1:583331‑M2/101‑45 (MQ=255)
                                            ttATCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttg                                                         >  1:769934‑M2/1‑56 (MQ=255)
                                              aTCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtc                                                       >  1:221826‑M2/1‑54 (MQ=255)
                                               tCAGGCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggtgttcacgccgcatccggcatgaacgacgcgcactttgtca                                                      >  1:756952‑M2/1‑53 (MQ=255)
                                                  ggCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaaca                                                   <  2:271758‑M2/101‑52 (MQ=255)
                                                   gCCTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaa                                                  <  2:1330721‑M2/101‑53 (MQ=255)
                                                     cTACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatc                                                <  2:1703675‑M2/101‑55 (MQ=255)
                                                      tACATGGTCCTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatct                                               <  2:1560544‑M2/101‑56 (MQ=255)
                                                        acatggtcctgcaataTATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctg                                              >  1:259808‑M2/8‑45 (MQ=255)
                                                          atggtcctgcaaTATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgac                                            >  2:880145‑M2/6‑43 (MQ=255)
                                                          atggtcctgcaaTATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgac                                            >  1:1718821‑M2/6‑43 (MQ=255)
                                                          atggtcctgcaaTATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgac                                            >  1:1591935‑M2/6‑43 (MQ=255)
                                                           tggtcctgcaATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacg                                           <  1:999986‑M2/97‑60 (MQ=255)
                                                           tggtcctgcaATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacg                                           >  1:434033‑M2/5‑42 (MQ=255)
                                                             gtcctgCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgtt                                         <  2:215678‑M2/99‑62 (MQ=255)
                                                              tcctGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgtta                                        >  1:1560550‑M2/2‑39 (MQ=255)
                                                              tcctGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgtta                                        <  2:1120461‑M2/100‑63 (MQ=255)
                                                              tcctGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgtta                                        >  1:34899‑M2/2‑39 (MQ=255)
                                                               ccTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttag                                       <  1:93412‑M2/101‑64 (MQ=255)
                                                                  gCAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcat                                    >  2:999362‑M2/1‑35 (MQ=255)
                                                                   cAATATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatc                                   >  1:1641933‑M2/1‑34 (MQ=255)
                                                                    aaTATATTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatca                                  <  1:1636176‑M2/101‑69 (MQ=255)
                                                                      tatatTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcaga                                >  1:839436‑M2/1‑31 (MQ=255)
                                                                        tatTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaag                              >  1:845837‑M2/1‑29 (MQ=255)
                                                                        tatTGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaag                              >  2:1622644‑M2/1‑29 (MQ=255)
                                                                          ttGAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtg                            <  1:1168697‑M2/101‑75 (MQ=255)
                                                                            gAATTGGCAAGATTTTTGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtggg                          >  2:717184‑M2/1‑25 (MQ=255)
                                                                               tggcaagatttttgtaggccggataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtt                      <  1:1624691‑M2/92‑81 (MQ=255)
                                                                                 gcaagatttttgtaggccGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgttta                    >  2:517501‑M2/8‑19 (MQ=255)
                                                                                 gcaagatttttgtaggccGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgttta                    <  2:1177881‑M2/94‑83 (MQ=255)
                                                                                  caagatttttgtaggcCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtttac                   >  2:161395‑M2/7‑18 (MQ=255)
                                                                                          ttGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtttacgctcatat           >  1:1172015‑M2/1‑10 (MQ=255)
                                                                                          ttGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtttacgctcatat           >  2:1178220‑M2/1‑10 (MQ=255)
                                                                                           tGTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtttacgctcatata          <  1:1261482‑M2/101‑93 (MQ=255)
                                                                                             gTAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtttacgctcatatac         <  2:310681‑M2/101‑94 (MQ=255)
                                                                                              tAGGCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtttacgctcatatacc        >  1:1154211‑M2/1‑7 (MQ=255)
                                                                                                 gCCGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtttacgctcatataccacg     >  2:807062‑M2/1‑4 (MQ=255)
                                                                                                  ccGgataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtttacgctcatataccacgt    >  2:681345‑M2/1‑3 (MQ=255)
                                                                                                    ggataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtttacgctcatataccacgtac  >  1:1337811‑M2/1‑1 (MQ=255)
                                                                                                    ggataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtttacgctcatataccacgtac  <  1:635072‑M2/101‑101 (MQ=255)
                                                                                                    ggataaggcgttcacgccgcatccggcatgaacgacgcgcactttgtcaacaatctgacgttagcatcagaagtgggtgtttacgctcatataccacgtac  >  2:280236‑M2/1‑1 (MQ=255)
                                                                                                    |                                                                                                    
GGCGCTGAGGTTATGCAAACGTAAAGCTGCCTGATGCGCTATGCTTATCAGGCCTACATAGTCCCTGCAATATATTGAATTAGCAAGGTTTTGTAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  28/36728‑36827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.