New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 113 | = 14540 | 0 (0.000) | 33 (0.550) | 19/180 | 2.2 | 100% | intergenic (–/–) | –/– | –/– |
? | 218 | 11 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC > 218/1‑109 | cggatgcggcgtgaacgccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGc > 2:463075‑M2/81‑101 (MQ=255) ggatgcggcgtgaacgccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGcc < 2:194957‑M2/22‑1 (MQ=255) tgcggcgtgaacgccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTAc < 1:675621‑M2/25‑1 (MQ=255) gtgaacgccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGttttt > 1:1687423‑M2/71‑101 (MQ=255) gtgaacgccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGttttt > 1:113972‑M2/71‑101 (MQ=255) gtgaacgccttatcaggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGttttt > 1:327391‑M2/71‑101 (MQ=255) tgaacgccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGtttttt > 2:1633988‑M2/70‑101 (MQ=255) gaacgccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTa > 2:1416056‑M2/69‑101 (MQ=255) aacgccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTAc > 2:755810‑M2/68‑101 (MQ=255) acgccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcggcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTAct > 1:1099849‑M2/67‑101 (MQ=255) gccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTActct < 1:705278‑M2/37‑1 (MQ=255) gccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTActct > 1:508807‑M2/65‑101 (MQ=255) ccttatccggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCtt < 2:1078638‑M2/38‑1 (MQ=255) cggcctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCa < 1:1416062‑M2/45‑1 (MQ=255) cctacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATaa > 1:499327‑M2/54‑101 (MQ=255) tacggttctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAAcc < 1:1503549‑M2/50‑1 (MQ=255) tctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAg < 1:1623775‑M2/56‑1 (MQ=255) ctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAgc < 1:1462092‑M2/57‑1 (MQ=255) ctggcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAgc < 2:1035375‑M2/57‑1 (MQ=255) gcaccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGcgcc < 2:1110696‑M2/60‑1 (MQ=255) ccttttgtaggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCcgcg < 2:969381‑M2/63‑1 (MQ=255) ggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCt > 1:1607723‑M2/30‑101 (MQ=255) ggcctgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCt < 1:729214‑M2/72‑1 (MQ=255) tgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGaa > 2:725622‑M2/26‑101 (MQ=255) tgataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGaa < 1:1535188‑M2/76‑1 (MQ=255) gataagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAAt < 2:1006326‑M2/77‑1 (MQ=255) aagacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCAc > 1:50607‑M2/22‑101 (MQ=255) gacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCg < 2:403319‑M2/82‑1 (MQ=255) gacgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCg < 1:1255094‑M2/82‑1 (MQ=255) acgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGt < 1:1667260‑M2/83‑1 (MQ=255) acgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGt < 1:1587803‑M2/83‑1 (MQ=255) cgcggcaagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTg < 1:1184580‑M2/84‑1 (MQ=255) aagcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGc > 2:1299406‑M2/12‑101 (MQ=255) agcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGcc > 2:1011085‑M2/11‑101 (MQ=255) gtcgcatCAGGCGTGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTa < 1:463080‑M2/94‑1 (MQ=255) atCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAc > 2:158393‑M2/3‑101 (MQ=255) atCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAc > 1:838946‑M2/3‑101 (MQ=255) atCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAc > 2:1438946‑M2/3‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC > 218/1‑109 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |