New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 112 | = 14615 | 0 (0.000) | 45 (0.920) +ATGGCTGTGGCTACAGCCACAGCGCCT |
35/146 | 0.4 | 100% | intergenic (–/–) | –/– | –/– |
? | 171 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCTGC > 171/1‑101 | ctgagcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctt > 1:134895‑M2/101‑101 (MQ=255) ctgagcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctt > 2:870592‑M2/101‑101 (MQ=255) ctgagcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctt < 1:421973‑M2/1‑1 (MQ=255) ctgagcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctt > 2:869968‑M2/101‑101 (MQ=255) gagcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgccttct < 1:1601403‑M2/3‑1 (MQ=255) gcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgccttcttc > 2:1582147‑M2/97‑101 (MQ=255) gccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCt < 1:1142508‑M2/8‑1 (MQ=255) gataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCttgtt > 1:287534‑M2/90‑101 (MQ=255) ataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCttgttg > 1:700399‑M2/89‑101 (MQ=255) aatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGcc > 1:1635392‑M2/87‑101 (MQ=255) atgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCa > 1:1551640‑M2/86‑101 (MQ=255) atgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCa < 1:1575674‑M2/16‑1 (MQ=255) tccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTc < 1:867221‑M2/20‑1 (MQ=255) gaactgccagtgaaattttgctcgagcacggcgttcgacgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCgtccg > 1:1065037‑M2/77‑99 (MQ=255) ctgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGaa > 2:307311‑M2/74‑101 (MQ=255) tgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAAt > 2:1275680‑M2/73‑101 (MQ=255) cagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgc > 1:1404936‑M2/70‑101 (MQ=255) cagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgc > 1:1364509‑M2/70‑101 (MQ=255) agtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgcg > 2:353326‑M2/69‑101 (MQ=255) gtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgcgg > 2:1643058‑M2/68‑101 (MQ=255) gtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgcgg > 1:1427278‑M2/68‑101 (MQ=255) gtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgcgg < 2:1542886‑M2/34‑1 (MQ=255) aaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGgcgc > 1:138977‑M2/65‑101 (MQ=255) gctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATaaa < 2:551376‑M2/44‑1 (MQ=255) gctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTATTGCCAGTTCGTCAGGAATAGCGGCGCAAATaaa < 1:1532920‑M2/44‑1 (MQ=255) ctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAg < 1:936169‑M2/45‑1 (MQ=255) cgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGAc < 1:1514558‑M2/47‑1 (MQ=255) ggcgcggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACtt < 1:1704153‑M2/49‑1 (MQ=255) agcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGTCtt < 2:526567‑M2/49‑1 (MQ=255) gcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACttt < 1:759419‑M2/50‑1 (MQ=255) ggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTc > 2:314189‑M2/48‑101 (MQ=255) ggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTc < 2:271771‑M2/54‑1 (MQ=255) gttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCAtt < 2:105363‑M2/57‑1 (MQ=255) ttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCAttt < 2:413436‑M2/58‑1 (MQ=255) ttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCAttt < 1:1297264‑M2/58‑1 (MQ=255) gtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGt < 1:1564085‑M2/61‑1 (MQ=255) cgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGttt < 1:1192839‑M2/63‑1 (MQ=255) cgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGttt < 1:846498‑M2/63‑1 (MQ=255) cgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGttt < 2:102344‑M2/63‑1 (MQ=255) gccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGtttt < 1:223907‑M2/64‑1 (MQ=255) agcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAAc > 2:748264‑M2/35‑101 (MQ=255) agcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAAc > 1:328458‑M2/35‑101 (MQ=255) gcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAAcc < 1:1541367‑M2/68‑1 (MQ=255) cttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCt < 1:889846‑M2/69‑1 (MQ=255) aatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATg > 2:442231‑M2/29‑101 (MQ=255) atggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGa < 1:1102940‑M2/74‑1 (MQ=255) ggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACa > 2:48892‑M2/26‑101 (MQ=255) tgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGAt < 2:251795‑M2/79‑1 (MQ=255) ctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAg < 2:1427272‑M2/84‑1 (MQ=255) tacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAgg < 2:977064‑M2/85‑1 (MQ=255) tacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAgg < 2:1404930‑M2/85‑1 (MQ=255) acagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGa < 2:40921‑M2/86‑1 (MQ=255) cagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGCCTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGAt < 2:1325897‑M2/87‑1 (MQ=255) gccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGa < 2:1364503‑M2/89‑1 (MQ=255) ccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGaa < 2:245141‑M2/90‑1 (MQ=255) ctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCt < 1:870597‑M2/99‑1 (MQ=255) ctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCt > 1:401367‑M2/3‑101 (MQ=255) ctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCt < 1:231824‑M2/99‑1 (MQ=255) tTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCTg > 1:363032‑M2/2‑101 (MQ=255) tTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCTg > 1:1338285‑M2/2‑101 (MQ=255) tCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCTGc < 2:800866/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCTGC > 171/1‑101 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |