New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 112 = 146150 (0.000)45 (0.920)
+ATGGCTGTGGCTACAGCCACAGCGCCT
35/146 0.4 100% intergenic (–/–) –/– –/–
?171 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCTGC  >  171/1‑101
                                                                                                    |                                                                                                    
ctgagcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctt                                                                                                      >  1:134895‑M2/101‑101 (MQ=255)
ctgagcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctt                                                                                                      >  2:870592‑M2/101‑101 (MQ=255)
ctgagcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctt                                                                                                      <  1:421973‑M2/1‑1 (MQ=255)
ctgagcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctt                                                                                                      >  2:869968‑M2/101‑101 (MQ=255)
  gagcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgccttct                                                                                                    <  1:1601403‑M2/3‑1 (MQ=255)
    gcagccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgccttcttc                                                                                                  >  2:1582147‑M2/97‑101 (MQ=255)
       gccggataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCt                                                                                               <  1:1142508‑M2/8‑1 (MQ=255)
           gataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCttgtt                                                                                           >  1:287534‑M2/90‑101 (MQ=255)
            ataatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCttgttg                                                                                          >  1:700399‑M2/89‑101 (MQ=255)
              aatgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGcc                                                                                        >  1:1635392‑M2/87‑101 (MQ=255)
               atgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCa                                                                                       >  1:1551640‑M2/86‑101 (MQ=255)
               atgttccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCa                                                                                       <  1:1575674‑M2/16‑1 (MQ=255)
                   tccaggaactgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTc                                                                                   <  1:867221‑M2/20‑1 (MQ=255)
                        gaactgccagtgaaattttgctcgagcacggcgttcgacgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCgtccg                                                                              >  1:1065037‑M2/77‑99 (MQ=255)
                           ctgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGaa                                                                           >  2:307311‑M2/74‑101 (MQ=255)
                            tgccagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAAt                                                                          >  2:1275680‑M2/73‑101 (MQ=255)
                               cagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgc                                                                       >  1:1404936‑M2/70‑101 (MQ=255)
                               cagtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgc                                                                       >  1:1364509‑M2/70‑101 (MQ=255)
                                agtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgcg                                                                      >  2:353326‑M2/69‑101 (MQ=255)
                                 gtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgcgg                                                                     >  2:1643058‑M2/68‑101 (MQ=255)
                                 gtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgcgg                                                                     >  1:1427278‑M2/68‑101 (MQ=255)
                                 gtgaaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAgcgg                                                                     <  2:1542886‑M2/34‑1 (MQ=255)
                                    aaattttgctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGgcgc                                                                  >  1:138977‑M2/65‑101 (MQ=255)
                                           gctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATaaa                                                           <  2:551376‑M2/44‑1 (MQ=255)
                                           gctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTATTGCCAGTTCGTCAGGAATAGCGGCGCAAATaaa                                                           <  1:1532920‑M2/44‑1 (MQ=255)
                                            ctcgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAg                                                          <  1:936169‑M2/45‑1 (MQ=255)
                                              cgagcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGAc                                                        <  1:1514558‑M2/47‑1 (MQ=255)
                                                ggcgcggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACtt                                                      <  1:1704153‑M2/49‑1 (MQ=255)
                                                agcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGTCtt                                                      <  2:526567‑M2/49‑1 (MQ=255)
                                                 gcacggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACttt                                                     <  1:759419‑M2/50‑1 (MQ=255)
                                                     ggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTc                                                 >  2:314189‑M2/48‑101 (MQ=255)
                                                     ggcgttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTc                                                 <  2:271771‑M2/54‑1 (MQ=255)
                                                        gttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCAtt                                              <  2:105363‑M2/57‑1 (MQ=255)
                                                         ttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCAttt                                             <  2:413436‑M2/58‑1 (MQ=255)
                                                         ttcgtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCAttt                                             <  1:1297264‑M2/58‑1 (MQ=255)
                                                            gtcgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGt                                          <  1:1564085‑M2/61‑1 (MQ=255)
                                                              cgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGttt                                        <  1:1192839‑M2/63‑1 (MQ=255)
                                                              cgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGttt                                        <  1:846498‑M2/63‑1 (MQ=255)
                                                              cgccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGttt                                        <  2:102344‑M2/63‑1 (MQ=255)
                                                               gccagcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGtttt                                       <  1:223907‑M2/64‑1 (MQ=255)
                                                                  agcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAAc                                    >  2:748264‑M2/35‑101 (MQ=255)
                                                                  agcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAAc                                    >  1:328458‑M2/35‑101 (MQ=255)
                                                                   gcttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAAcc                                   <  1:1541367‑M2/68‑1 (MQ=255)
                                                                    cttcaatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCt                                  <  1:889846‑M2/69‑1 (MQ=255)
                                                                        aatggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATg                              >  2:442231‑M2/29‑101 (MQ=255)
                                                                         atggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGa                             <  1:1102940‑M2/74‑1 (MQ=255)
                                                                           ggctgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACa                           >  2:48892‑M2/26‑101 (MQ=255)
                                                                              tgtggctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGAt                        <  2:251795‑M2/79‑1 (MQ=255)
                                                                                   ctacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAg                   <  2:1427272‑M2/84‑1 (MQ=255)
                                                                                    tacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAgg                  <  2:977064‑M2/85‑1 (MQ=255)
                                                                                    tacagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAgg                  <  2:1404930‑M2/85‑1 (MQ=255)
                                                                                     acagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGa                 <  2:40921‑M2/86‑1 (MQ=255)
                                                                                      cagccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGCCTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGAt                <  2:1325897‑M2/87‑1 (MQ=255)
                                                                                        gccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGa              <  2:1364503‑M2/89‑1 (MQ=255)
                                                                                         ccacagcgcctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGaa             <  2:245141‑M2/90‑1 (MQ=255)
                                                                                                  ctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCt    <  1:870597‑M2/99‑1 (MQ=255)
                                                                                                  ctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCt    >  1:401367‑M2/3‑101 (MQ=255)
                                                                                                  ctTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCt    <  1:231824‑M2/99‑1 (MQ=255)
                                                                                                   tTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCTg   >  1:363032‑M2/2‑101 (MQ=255)
                                                                                                   tTCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCTg   >  1:1338285‑M2/2‑101 (MQ=255)
                                                                                                    tCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCTGc  <  2:800866/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTTCCCTTGTTGCCAGTTCGTCAGGAATAGCGGCGCAAATAAAGACTTTACTCATTTTGTTTTAACCTCATGACAGATTTAAGGATGAACAAATCCCTGC  >  171/1‑101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.