New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 111 | = 9632 | 90 (1.350) | 32 (0.480) | 22/200 | 2.5 | 41.6% | intergenic (–/–) | –/– | –/– |
? | 176 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAATGTG > 176/1‑101 | acaaagtgttcgttgtttttgccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATa > 2:41114‑M2/82‑101 (MQ=255) acaaagtgttcgttgtttttgccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATa < 1:1285918‑M2/20‑1 (MQ=255) aagtgttcgttgtttttgccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGc < 2:1569772‑M2/23‑1 (MQ=255) gtgttcgttgtttttgccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGt < 2:772358‑M2/25‑1 (MQ=255) ttcgttgtttttgccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAgc < 1:103613‑M2/28‑1 (MQ=255) tcgttgtttttgccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAgcg > 1:932989‑M2/73‑101 (MQ=255) gttgtttttgccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCa > 1:1701033‑M2/71‑101 (MQ=255) gtttttgccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCa > 1:33915‑M2/68‑101 (MQ=255) ttgccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCa < 1:543580‑M2/38‑1 (MQ=255) gccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAt < 1:193486‑M2/40‑1 (MQ=255) ccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt < 2:1437003‑M2/41‑1 (MQ=255) ccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt < 1:666328‑M2/41‑1 (MQ=255) ccggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtt > 1:1092723‑M2/61‑101 (MQ=255) cggatgcggcgtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTc > 1:1180735‑M2/60‑101 (MQ=255) cggcgggaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGtt > 2:1714590‑M2/54‑101 (MQ=255) gtgaacgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTc > 1:589446‑M2/50‑101 (MQ=255) acgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATAc < 2:80001‑M2/56‑1 (MQ=255) acgccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATAc < 1:1246497‑M2/56‑1 (MQ=255) gccttatccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGt > 1:1557421‑M2/44‑101 (MQ=255) tccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTaaaaaa < 2:816004‑M2/64‑1 (MQ=255) ccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAg < 2:1056471‑M2/65‑1 (MQ=255) ccggcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAg < 1:597973‑M2/65‑1 (MQ=255) gcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGc < 2:1052959‑M2/68‑1 (MQ=255) gcctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGc > 1:1068627‑M2/34‑101 (MQ=255) ctacaaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGa > 2:1438212‑M2/32‑101 (MQ=255) caaaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCt < 2:1186422‑M2/73‑1 (MQ=255) aaatcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTg > 1:815824‑M2/27‑101 (MQ=255) atcgcttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCg > 1:640640‑M2/25‑101 (MQ=255) ttaaattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGc > 2:1190582‑M2/20‑101 (MQ=255) aattcaatatattgcaCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCt < 2:1122947‑M2/85‑1 (MQ=255) caCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAAtg > 2:584821‑M2/3‑101 (MQ=255) caCCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAAtg > 2:243939‑M2/3‑101 (MQ=255) ccATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAAtgtg < 1:1570437/101‑1 (MQ=255) ccATCCTCGTAGGCCTGATAAGCCTAGCGCATCAGCCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAAtgtg < 2:222577/101‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCTGTGTTTGTCATACGTAAAAAAGGGCGATCTTGCGACCGCCCTTTTTTTATTAAATGTG > 176/1‑101 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |