| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 11 | = 54219 | 0 (0.000) | 25 (0.380) | 17/200 | 1.2 | 60.2% | intergenic (–/–) | –/– | –/– |
| ? | 51 | = 15503 | 33 (0.500) | intergenic (–/–) | –/– | –/– | |||||
GACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAG > 51/15404‑15603 | gcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGAcaa > 1:341828‑M2/63‑100 (MQ=255) acgCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACatt > 2:285396/1‑101 (MQ=255) acgCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACatt > 1:935085/1‑101 (MQ=255) cgCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACatta < 1:163161/101‑1 (MQ=255) aattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACaata > 2:1499820‑M2/61‑101 (MQ=255) aattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACaata < 1:138119‑M2/41‑1 (MQ=255) attaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGAcaataa > 2:392253‑M2/60‑100 (MQ=255) attaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGAcaataa > 1:647971‑M2/60‑100 (MQ=255) ttaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGacaataag > 1:659894‑M2/59‑99 (MQ=255) cTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACattatt > 1:929627/1‑101 (MQ=255) tttAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTg > 2:325444/1‑101 (MQ=255) tAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCg > 1:1578783/1‑101 (MQ=255) actatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATccgacaataagtgc > 2:935227‑M2/56‑96 (MQ=255) actatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATccgacaataagtgc < 1:1705970‑M2/46‑6 (MQ=255) aaaTAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCgg < 2:826761/101‑1 (MQ=255) tatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCatccgacaataagtgccg > 2:436231‑M2/54‑94 (MQ=255) aaTAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGc > 1:762189/1‑101 (MQ=255) aCTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGttt < 2:837513/101‑1 (MQ=255) cTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAAGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTg > 2:59429/1‑101 (MQ=255) aaTGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGt < 1:1255538/101‑1 (MQ=255) aaTGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGt < 2:1511/101‑1 (MQ=255) aTGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTg > 1:1665185/1‑101 (MQ=255) tGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGc > 2:1049502/1‑101 (MQ=255) gTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGcc > 2:1414806/1‑101 (MQ=255) gTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGcc > 1:480356/1‑101 (MQ=255) aaaaaTCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGAt < 1:620464/101‑1 (MQ=255) aaaaaTCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGAt < 2:571640/101‑1 (MQ=255) aaaaaTCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGAt < 1:619491/101‑1 (MQ=255) aTCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATgcgg < 1:1716312/101‑1 (MQ=255) tCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATgcggc < 2:1284785/101‑1 (MQ=255) cGCCATACATAACACAAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTNNNNNNANGGCGCCGGATgcggcg > 2:957792/1‑101 (MQ=38) catacataACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGa > 1:1069835/1‑101 (MQ=255) tacataACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAgc > 2:142328/1‑101 (MQ=255) ataACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGcc > 2:1591858/1‑101 (MQ=255) ataACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGcc > 2:1535861/1‑101 (MQ=255) acacCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTa < 2:464456/101‑1 (MQ=255) cacCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTAt < 2:681750/101‑1 (MQ=255) tgcgatttgtaggtcggATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggttttt > 1:318774‑M2/8‑45 (MQ=255) gcgatttgtaggtcgGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggttttta > 2:1275265‑M2/7‑44 (MQ=255) cAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCg < 1:1564806/101‑1 (MQ=255) cAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCg > 2:358565/1‑101 (MQ=255) cAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCg > 2:930522/1‑101 (MQ=255) cAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCg < 2:706802/101‑1 (MQ=255) cgatttgtaggtcGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttat < 2:54928‑M2/96‑59 (MQ=255) atttgtaggTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattg < 2:903731‑M2/98‑61 (MQ=255) ttgtaGGTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaa > 1:1499826‑M2/2‑39 (MQ=255) tgtAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaag > 2:279171‑M2/1‑38 (MQ=255) tgtAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaag < 2:350295‑M2/101‑64 (MQ=255) tgtAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTAc > 2:1539247/1‑101 (MQ=255) tAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgt < 2:363509‑M2/101‑3 (MQ=255) atgtcGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagtta > 1:1339888‑M2/3‑35 (MQ=255) aGGTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagtta > 1:1396518‑M2/1‑35 (MQ=255) aGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgtt > 2:353710‑M2/1‑98 (MQ=255) ggTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaa > 1:331496‑M2/1‑34 (MQ=255) gTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaat > 1:259688‑M2/1‑33 (MQ=255) gTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaat < 1:1414500‑M2/101‑69 (MQ=255) gTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaat > 2:92568‑M2/1‑33 (MQ=255) gTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgtttt > 2:1093430‑M2/1‑96 (MQ=255) ggATAAGATGCGCAAGCATCTCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaat > 1:59429‑M2/1‑93 (MQ=255) ggATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaat > 2:362484‑M2/1‑93 (MQ=255) gATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatg > 2:1067426‑M2/1‑92 (MQ=255) gATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatg > 2:1465974‑M2/1‑92 (MQ=255) aTAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaac < 1:1462222‑M2/101‑74 (MQ=255) aTAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgc < 2:839361‑M2/101‑11 (MQ=255) tAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaact > 1:1601692‑M2/1‑27 (MQ=255) tAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaact < 2:456973‑M2/101‑75 (MQ=255) tAAGATGCGCAAGAATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaact < 2:948002‑M2/101‑75 (MQ=255) aGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaactac < 2:1629243‑M2/101‑77 (MQ=255) aGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccag > 2:929622‑M2/1‑88 (MQ=255) aGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccag > 2:701295‑M2/1‑88 (MQ=255) gcAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaa > 1:181240‑M2/1‑82 (MQ=255) aaGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatg < 2:1367043‑M2/101‑22 (MQ=255) aGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaactacccgccttga > 2:1405466‑M2/1‑16 (MQ=255) aGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatgg < 2:912890‑M2/101‑23 (MQ=255) gcatcgcatcCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggt < 1:734737‑M2/101‑24 (MQ=255) catcgcatcCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaactacccgccttgata < 2:1198086‑M2/101‑88 (MQ=255) atcgcatcCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaactacccgccttgataa < 2:1119647‑M2/101‑89 (MQ=255) tcgcatcCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaa < 1:364445‑M2/101‑27 (MQ=255) cgcatcCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaactacccgccttgataatc < 1:513407‑M2/101‑91 (MQ=255) cgcatcCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaat > 1:939807‑M2/1‑74 (MQ=255) atcCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaactacccgccttgataatctcg > 1:1192741‑M2/1‑8 (MQ=255) atcCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaactacccgccttgataatctcg < 2:527682‑M2/101‑94 (MQ=255) atcCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaatcaaactacccgccttgataatctcg < 2:49918‑M2/101‑94 (MQ=255) atcCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattac < 2:1148283‑M2/101‑31 (MQ=255) tcCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacc > 1:315078‑M2/1‑70 (MQ=255) ccGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacct < 1:1172752‑M2/101‑33 (MQ=255) gACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctgg < 2:1365971‑M2/101‑35 (MQ=255) aCATTATTGCGGCACAGGTGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctgga > 1:953736‑M2/1‑66 (MQ=255) aCATTATTGCGGCACAGGAGTTTGGCAACGGTGCGGGATGCGGGGCGAGCGCCTTATCCGGCTTACgttttaatgccagcaaaaatggtgaattacctgga > 1:1187234‑M2/1‑66 (MQ=255) attattGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggata < 1:396934‑M2/101‑38 (MQ=255) attattGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACgttttaatgccagcaaaaatggtgaattacctggata < 2:1472331‑M2/101‑38 (MQ=255) | GACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAG > 51/15404‑15603 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |