New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 11 | = 51864 | 71 (1.070) | 53 (0.920) | 40/172 | 0.3 | 63.4% | intergenic (–/–) | –/– | –/– |
? | 144 | = 10502 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
ATGTTCGTTAGCCTGGGCATTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATACTCTAAATAAT > 144/10403‑10516 | aTGTTCGTTAGCCTGGGCATTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCa < 2:368029‑M2/101‑2 (MQ=255) tGTTCGTTAGCCTGGGCATTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCat < 2:659518‑M2/101‑3 (MQ=255) gTTCGTTAGCCTGGGCATTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCata > 1:1411749‑M2/1‑98 (MQ=255) cGTTAGCCTGGGCATTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactc < 1:438919‑M2/101‑7 (MQ=255) gTTAGCCTGGGCATTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactct > 1:656500‑M2/1‑94 (MQ=255) aGCCTGGGCATTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaa < 1:1116840‑M2/101‑11 (MQ=255) gCCTGGGCATTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaat > 2:1462929‑M2/1‑90 (MQ=255) gctGGGCATTAAAGCCAATAACCGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaata > 1:486968‑M2/2‑89 (MQ=255) cTGGGCATTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataa > 2:514085‑M2/1‑88 (MQ=255) ggCATTAAAGCCAATAACGGTAAACAGACTAAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattc > 1:1070943‑M2/1‑85 (MQ=255) aTTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgag < 1:1367266‑M2/101‑20 (MQ=255) aTTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgag > 1:509197‑M2/1‑82 (MQ=255) aTTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgag < 1:1501746‑M2/101‑20 (MQ=255) aTTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgag < 2:17278‑M2/101‑20 (MQ=255) aTTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgag < 2:624890‑M2/101‑20 (MQ=255) aTTAAAGCCAATAACGGTAAACAGACTGAACATTGAGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgag < 2:1614844‑M2/101‑20 (MQ=255) ttAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagt > 2:298162‑M2/1‑81 (MQ=255) ttAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagt > 2:1451155‑M2/1‑81 (MQ=255) aaGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgc < 2:719617‑M2/101‑24 (MQ=255) gCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcag > 2:1254840‑M2/1‑76 (MQ=255) ccAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcagg < 1:1633310‑M2/101‑27 (MQ=255) ccAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcagg > 1:144790‑M2/1‑75 (MQ=255) ccAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcagg < 2:1304010‑M2/101‑27 (MQ=255) aaTAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaa > 2:829275‑M2/1‑73 (MQ=255) aTAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaag < 1:563248‑M2/101‑30 (MQ=255) aTAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaag < 1:863949‑M2/101‑30 (MQ=255) aTAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaag < 1:545335‑M2/101‑30 (MQ=255) aaCGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggc > 2:1002112‑M2/1‑70 (MQ=255) cGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcga > 2:1501740‑M2/1‑68 (MQ=255) cGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcga > 2:1711229‑M2/1‑68 (MQ=255) ggTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgac > 2:1638796‑M2/1‑67 (MQ=255) tAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaa < 2:1252712‑M2/101‑37 (MQ=255) aGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgag > 2:111527‑M2/1‑60 (MQ=255) aGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgag > 2:564300‑M2/1‑60 (MQ=255) aGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgag < 1:1664624‑M2/101‑42 (MQ=255) aCTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtg < 2:306096‑M2/101‑44 (MQ=255) gAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCAGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaat > 2:1135726‑M2/1‑55 (MQ=255) aaCATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatc < 2:724717‑M2/101‑48 (MQ=255) ttGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatcccca > 1:906183‑M2/1‑50 (MQ=255) gCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccagg > 1:744534‑M2/1‑48 (MQ=255) cTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagct < 1:848866‑M2/101‑58 (MQ=255) tGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagctta > 2:298737‑M2/1‑42 (MQ=255) tGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagctta < 2:346771‑M2/101‑60 (MQ=255) cAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttaca < 1:712654‑M2/101‑62 (MQ=255) cAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttaca > 2:1116835‑M2/1‑40 (MQ=255) tGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataa < 2:801445‑M2/101‑65 (MQ=255) cTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacatatgt < 2:516957‑M2/101‑67 (MQ=255) ttttCATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaag > 1:368029‑M2/1‑32 (MQ=255) cATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagtttcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgac > 2:132316‑M2/1‑28 (MQ=255) cATTTATTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgac > 1:1614850‑M2/1‑28 (MQ=255) aTTCTCTCCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactgggg < 1:380979‑M2/101‑79 (MQ=255) tcCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcg < 2:1655738‑M2/101‑85 (MQ=255) tcCTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcg > 1:1048209‑M2/1‑17 (MQ=255) cTGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaa < 1:420298‑M2/101‑87 (MQ=255) tGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacatatgtaagtgactggggtgagcgaat > 1:516962‑M2/1‑14 (MQ=255) tGGAGTTAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaac < 2:187276‑M2/101‑88 (MQ=255) tAAAAGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagac > 2:438914‑M2/1‑8 (MQ=255) aaaGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgc < 1:743560‑M2/101‑96 (MQ=255) aaaGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagcaagtgactggggtgagcgaacgcagacgc < 2:1358786‑M2/101‑96 (MQ=255) aaGTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgca > 1:313056‑M2/1‑5 (MQ=255) aGTCatcctctaaataatgcgagttgcaggaaagcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcag > 2:1303892‑M2/1‑4 (MQ=255) gTCatactctaaataattcgagttgcaggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagc > 1:1252717‑M2/1‑3 (MQ=255) | ATGTTCGTTAGCCTGGGCATTAAAGCCAATAACGGTAAACAGACTGAACATTGCGACTTGCAGTGCTTTTTTCATTTATTCTCTCCTGGAGTTAAAAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATACTCTAAATAAT > 144/10403‑10516 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |