| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 104 | 1 = | 0 (0.000) | 51 (0.990) +GAATCCCCAGGAGCTTACATAAG |
43/154 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 143 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGT > 143/1‑97 | agaacgacccggtggtggttagggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagt > 1:1053041‑M2/101‑101 (MQ=255)agaacgacccggtggtggttagggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagt > 1:272834‑M2/101‑101 (MQ=255) acgacccggtggtggttagggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagtaag < 1:989772‑M2/4‑1 (MQ=255) acgacccggtggtggttagggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagtaag > 1:1120763‑M2/98‑101 (MQ=255) acccggtggtggttagggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGa > 2:890846‑M2/95‑101 (MQ=255) cccggtggtggttagggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGAc < 1:727079‑M2/8‑1 (MQ=255) ggtggtggttagggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTgg < 1:503721‑M2/11‑1 (MQ=255) gtggtggttagggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTggg > 1:525603‑M2/90‑101 (MQ=255) tggttagggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGa > 2:1637169‑M2/86‑101 (MQ=255) ggttagggtattacttcatataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAg < 1:1427650‑M2/17‑1 (MQ=255) gttagggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAgg < 2:195369‑M2/18‑1 (MQ=255) tagggtattacttcacataccctatggatttctgggggcagcaagggagcaagcgccagaatccccaggagcttacataagAAAGTGACTGGGGCGAAGGc > 2:46202‑M2/82‑101 (MQ=255) agggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCg < 2:217317‑M2/21‑1 (MQ=255) ggtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTg > 1:853660‑M2/79‑101 (MQ=255) gtattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCgaga > 1:1090956‑M2/78‑101 (MQ=255) tattacttcacataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGaa > 1:358851‑M2/77‑101 (MQ=255) actgcacctaccctatgaatttctgagtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTa < 2:726434‑M2/29‑1 (MQ=255) acataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAAcgcc > 2:74273‑M2/68‑101 (MQ=255) ataccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAAcgccgc > 2:1483664‑M2/66‑101 (MQ=255) ccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGc > 1:914154‑M2/63‑101 (MQ=255) ccctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGc < 2:1287205‑M2/39‑1 (MQ=255) cctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCg > 2:342910‑M2/62‑101 (MQ=255) cctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCg < 2:525598‑M2/40‑1 (MQ=255) cctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCg > 2:506463‑M2/62‑101 (MQ=255) cctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCg > 2:818062‑M2/62‑101 (MQ=255) cctatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCg > 1:804358‑M2/62‑101 (MQ=255) ctatggatttctgggtgcagcaaggtagcaagcgccagaatccacaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCgg < 2:1027316‑M2/41‑1 (MQ=255) tatggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGc > 1:1386986‑M2/60‑101 (MQ=255) ggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTg < 1:752674‑M2/45‑1 (MQ=255) ggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTg < 1:1250043‑M2/45‑1 (MQ=255) ggatttctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTg < 2:899763‑M2/45‑1 (MQ=255) ttctgggtgcagcaaggtaccaagcgccagaatccccaggagcttacttaagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAg < 2:752084‑M2/49‑1 (MQ=255) ctgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAgac < 1:1518333‑M2/51‑1 (MQ=255) tgggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAgacg > 2:57014‑M2/50‑101 (MQ=255) ggtgcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAgacgac < 2:853655‑M2/54‑1 (MQ=255) gcagcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACggg < 2:1067973‑M2/57‑1 (MQ=255) agcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTa < 1:57014‑M2/59‑1 (MQ=255) gcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTAt < 1:1447220‑M2/60‑1 (MQ=255) gcaaggtagcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTAt < 2:1116858‑M2/60‑1 (MQ=255) caaggtagcaagcgccagaatccccaggagcttacataagTAAGTGGCTGGGGTGAGGGCGTGAAGCTAACCCCGCTGCGGCCTGAAAGACGACGGGTATg < 2:634888‑M2/61‑1 (MQ=255) agcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGAccgcc > 1:743956‑M2/35‑101 (MQ=255) agcaagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGAccgcc < 2:905851‑M2/67‑1 (MQ=255) caagcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCgg > 1:1081420‑M2/33‑101 (MQ=255) agcgccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGgag > 2:1420839‑M2/31‑101 (MQ=255) agcgccagaatccccaggagattacataagTAAGTGGCTGGGGTGAGGCCGTGAAGCTAACGCCTCTGCGGCCTGAAAGACGACGGGTATGACCGCCGgag < 2:184729‑M2/71‑1 (MQ=255) gccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATa < 1:675140‑M2/74‑1 (MQ=255) ccataatcctcaggagcttacataagTAAGTGGCTGGGGTGAGGCCGTGAAGCTAACGCCGCTTCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATaa < 2:1191992‑M2/75‑1 (MQ=255) ccagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATaa < 1:1576041‑M2/75‑1 (MQ=255) cagaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATaaa < 1:1627686‑M2/76‑1 (MQ=255) agaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAat < 1:203968‑M2/77‑1 (MQ=255) agaatccccaggagcttacataagTAAGTGACTGGGGCGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTAGGACCGCCGGCGATAAat > 2:1688061‑M2/25‑101 (MQ=255) gaatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAata > 1:1466367‑M2/24‑101 (MQ=255) aatccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAatat < 2:1166048‑M2/79‑1 (MQ=255) atccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAatata > 1:1073436‑M2/22‑101 (MQ=255) atccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAatata > 1:989632‑M2/22‑101 (MQ=255) atccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAatata < 2:1466361‑M2/80‑1 (MQ=255) acccccaggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAatata < 2:594215‑M2/80‑1 (MQ=255) caggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATagag < 2:471169‑M2/85‑1 (MQ=255) aggagcttacataagTAAGTGACTGGGGTGAGGTCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAgg < 2:297897‑M2/86‑1 (MQ=255) aggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAgg > 1:696824‑M2/16‑101 (MQ=255) ggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGt < 2:914149‑M2/87‑1 (MQ=255) ggagcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGt > 1:910177‑M2/15‑101 (MQ=255) gcttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCCGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCat < 1:1688067‑M2/90‑1 (MQ=255) cttacataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCatg < 1:585968‑M2/91‑1 (MQ=255) ataagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAg < 2:190628‑M2/96‑1 (MQ=255) taagTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGt > 1:641763‑M2/5‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGT > 143/1‑97 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |