New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 10 = 37NA (NA)40 (0.810)
+GCCATTACCCGTAGGCCTGATAAGCG
26/148 0.5 100% intergenic (–/–) –/– –/–
?203 = 4306 0 (0.000)intergenic (–/–) –/– –/–

TGTCTACGTAGTGGCTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  203/4206‑4306
                                                                                                    |                                                                        
tGTCTACGTAGTGGCTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTg                                                                          <  1:1635456/101‑1 (MQ=255)
       gTAGTGGCTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttat                                                                   >  1:395341‑M2/1‑94 (MQ=255)
        tAGTGGCTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatc                                                                  >  1:117508‑M2/1‑93 (MQ=255)
              cTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcct                                                            >  1:744510‑M2/1‑87 (MQ=255)
               tCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggccta                                                           >  2:666930‑M2/1‑86 (MQ=255)
                cgcgAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctac                                                          >  1:1480432‑M2/1‑85 (MQ=255)
                  cgAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgg                                                        <  1:36536‑M2/101‑19 (MQ=255)
                   gAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacggg                                                       <  1:1138042‑M2/101‑20 (MQ=255)
                        aaCCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatg                                                  >  1:306739‑M2/1‑77 (MQ=255)
                          ccTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggc                                                <  1:1368721‑M2/101‑27 (MQ=255)
                           cTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggct                                               <  1:1231029‑M2/101‑28 (MQ=255)
                            tttAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggctt                                              >  2:1331532‑M2/1‑73 (MQ=255)
                              tAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgt                                            <  2:562804‑M2/101‑31 (MQ=255)
                               aaaaaCTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgta                                           <  2:32114‑M2/101‑32 (MQ=255)
                                aaaaCTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttttag                                          <  1:371749‑M2/101‑33 (MQ=255)
                                aaaaCTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtag                                          <  1:1051047‑M2/101‑33 (MQ=255)
                                       tCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccgggt                                   <  2:308510‑M2/101‑40 (MQ=255)
                                       tCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggat                                   >  1:1158628‑M2/1‑62 (MQ=255)
                                         ttAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataa                                 <  2:1657349‑M2/101‑42 (MQ=255)
                                          tAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataag                                >  2:1273108‑M2/1‑59 (MQ=255)
                                          tAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataag                                >  2:1372794‑M2/1‑59 (MQ=255)
                                           aGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataagg                               >  1:1314133‑M2/1‑58 (MQ=255)
                                           aGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataagg                               >  2:773892‑M2/1‑58 (MQ=255)
                                           aGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataagg                               >  1:1331597‑M2/1‑58 (MQ=255)
                                            gtgtCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggc                              >  2:413796‑M2/1‑57 (MQ=255)
                                             tgtCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcg                             <  1:1655210‑M2/101‑46 (MQ=255)
                                                cAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttc                          >  1:654668‑M2/1‑53 (MQ=255)
                                                 aGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttca                         <  2:91684‑M2/101‑50 (MQ=255)
                                                  ggggCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcac                        <  1:1239793‑M2/101‑51 (MQ=255)
                                                  ggggCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcac                        >  1:562611‑M2/1‑51 (MQ=255)
                                                  ggggCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcac                        >  1:185132‑M2/1‑51 (MQ=255)
                                                   gggCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacg                       >  2:1153629‑M2/1‑50 (MQ=255)
                                                      cAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccg                    <  2:545999‑M2/101‑55 (MQ=255)
                                                       aGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgc                   <  1:1661709‑M2/101‑56 (MQ=255)
                                                       aGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgc                   <  2:834918‑M2/101‑56 (MQ=255)
                                                       aGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcggtcacgcccc                   <  1:276814‑M2/101‑56 (MQ=255)
                                                        gTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgca                  <  1:354086‑M2/101‑57 (MQ=255)
                                                        gTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacaccgca                  <  1:62590‑M2/101‑57 (MQ=255)
                                                         tttttAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcat                 >  1:634765‑M2/1‑44 (MQ=255)
                                                            ttAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccg              <  2:72742‑M2/101‑61 (MQ=255)
                                                              aaaGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatgtcttgtaggccggataaggcgttcacgccgcatccggc            <  1:1510522‑M2/101‑63 (MQ=255)
                                                              aaaGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggc            <  2:122120‑M2/101‑63 (MQ=255)
                                                               aaGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggca           <  2:663042‑M2/101‑64 (MQ=255)
                                                                aGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggcac          <  2:1685754‑M2/101‑65 (MQ=255)
                                                                aGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcggtcacgccgcatccggcac          <  1:1014268‑M2/101‑65 (MQ=255)
                                                                 gATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggcact         >  2:642121‑M2/1‑36 (MQ=255)
                                                                  aTTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccgggtaaggcgttcacgccgcatccggcactg        <  2:250392‑M2/101‑67 (MQ=255)
                                                                   tttCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggcactgg       >  2:756469‑M2/1‑34 (MQ=255)
                                                                     tCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggcccgataaggcgttcacgccgcatccggcactggtt     <  1:490613‑M2/101‑70 (MQ=255)
                                                                        tGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggcactggttgcc  <  1:1569372‑M2/101‑73 (MQ=255)
                                                                                                    |                                                                        
TGTCTACGTAGTGGCTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  203/4206‑4306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.