New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 10 | = 37 | NA (NA) | 40 (0.810) +GCCATTACCCGTAGGCCTGATAAGCG |
26/148 | 0.5 | 100% | intergenic (–/–) | –/– | –/– |
? | 203 | = 4306 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TGTCTACGTAGTGGCTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 203/4206‑4306 | tGTCTACGTAGTGGCTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTg < 1:1635456/101‑1 (MQ=255) gTAGTGGCTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttat > 1:395341‑M2/1‑94 (MQ=255) tAGTGGCTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatc > 1:117508‑M2/1‑93 (MQ=255) cTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcct > 1:744510‑M2/1‑87 (MQ=255) tCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggccta > 2:666930‑M2/1‑86 (MQ=255) cgcgAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctac > 1:1480432‑M2/1‑85 (MQ=255) cgAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgg < 1:36536‑M2/101‑19 (MQ=255) gAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacggg < 1:1138042‑M2/101‑20 (MQ=255) aaCCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatg > 1:306739‑M2/1‑77 (MQ=255) ccTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggc < 1:1368721‑M2/101‑27 (MQ=255) cTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggct < 1:1231029‑M2/101‑28 (MQ=255) tttAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggctt > 2:1331532‑M2/1‑73 (MQ=255) tAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgt < 2:562804‑M2/101‑31 (MQ=255) aaaaaCTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgta < 2:32114‑M2/101‑32 (MQ=255) aaaaCTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttttag < 1:371749‑M2/101‑33 (MQ=255) aaaaCTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtag < 1:1051047‑M2/101‑33 (MQ=255) tCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccgggt < 2:308510‑M2/101‑40 (MQ=255) tCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggat > 1:1158628‑M2/1‑62 (MQ=255) ttAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataa < 2:1657349‑M2/101‑42 (MQ=255) tAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataag > 2:1273108‑M2/1‑59 (MQ=255) tAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataag > 2:1372794‑M2/1‑59 (MQ=255) aGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataagg > 1:1314133‑M2/1‑58 (MQ=255) aGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataagg > 2:773892‑M2/1‑58 (MQ=255) aGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataagg > 1:1331597‑M2/1‑58 (MQ=255) gtgtCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggc > 2:413796‑M2/1‑57 (MQ=255) tgtCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcg < 1:1655210‑M2/101‑46 (MQ=255) cAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttc > 1:654668‑M2/1‑53 (MQ=255) aGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttca < 2:91684‑M2/101‑50 (MQ=255) ggggCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcac < 1:1239793‑M2/101‑51 (MQ=255) ggggCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcac > 1:562611‑M2/1‑51 (MQ=255) ggggCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcac > 1:185132‑M2/1‑51 (MQ=255) gggCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacg > 2:1153629‑M2/1‑50 (MQ=255) cAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccg < 2:545999‑M2/101‑55 (MQ=255) aGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgc < 1:1661709‑M2/101‑56 (MQ=255) aGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgc < 2:834918‑M2/101‑56 (MQ=255) aGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcggtcacgcccc < 1:276814‑M2/101‑56 (MQ=255) gTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgca < 1:354086‑M2/101‑57 (MQ=255) gTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacaccgca < 1:62590‑M2/101‑57 (MQ=255) tttttAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcat > 1:634765‑M2/1‑44 (MQ=255) ttAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccg < 2:72742‑M2/101‑61 (MQ=255) aaaGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatgtcttgtaggccggataaggcgttcacgccgcatccggc < 1:1510522‑M2/101‑63 (MQ=255) aaaGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggc < 2:122120‑M2/101‑63 (MQ=255) aaGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggca < 2:663042‑M2/101‑64 (MQ=255) aGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggcac < 2:1685754‑M2/101‑65 (MQ=255) aGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcggtcacgccgcatccggcac < 1:1014268‑M2/101‑65 (MQ=255) gATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggcact > 2:642121‑M2/1‑36 (MQ=255) aTTTCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccgggtaaggcgttcacgccgcatccggcactg < 2:250392‑M2/101‑67 (MQ=255) tttCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggcactgg > 2:756469‑M2/1‑34 (MQ=255) tCCTGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggcccgataaggcgttcacgccgcatccggcactggtt < 1:490613‑M2/101‑70 (MQ=255) tGCATTTCTTTGTTACGCCTGATGCGCTGcgcttatcaggcctacgggtaatggcttgtaggccggataaggcgttcacgccgcatccggcactggttgcc < 1:1569372‑M2/101‑73 (MQ=255) | TGTCTACGTAGTGGCTCGCGAAGGAACCTTTAAAAACTGTCTTAGTGTCAGGGGCAGTTTTTAAAGATTTCCTGCATTTCTTTGTTACGCCTGATGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 203/4206‑4306 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |