New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 10 | 17 = | 49 (0.740) | 36 (0.630) | 16/172 | 2.9 | 63.1% | intergenic (–/–) | –/– | –/– |
? | 54 | 15 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCGGCGC > 54/1‑112 | gcttgcctgatgcgcgatgcttatcaggcctaccagaagattgcaatatattgaatttgcactgttttgtaggccggataaggcgttTACGCCGCATCCgg < 1:1202580‑M2/14‑1 (MQ=255) cttgcctgatgcgcgatgcttatcaggcctaccagaagattgcaatatattgaatttgcactgttttgtaggccggataaggcgttTACGCCGCATCCGGc > 1:1382808‑M2/87‑101 (MQ=255) cttgcctgatgcgcgatgcttatcaggcctaccagaagattgcaatatattgaatttgcactgttttgtaggccggataaggcgttTACGCCGCATCCGGc > 2:1464671‑M2/87‑101 (MQ=255) cttgcctgatgcgcgatgcttatcaggcctaccagaagattgcaatatattgaatttgcactgttttgtaggccggataaggcgttTACGCCGCATCCGGc < 1:1333832‑M2/15‑1 (MQ=255) cctgatgcgcgatgcttatcaggcctaccagaagattgcaatatattgaatttgcactgttttgtaggccggataaggcgttTACGCCGCATCCGgcatga < 1:431542‑M2/19‑3 (MQ=255) tgatgcgcgatgcttatcaggcctaccagaagattgcaatatattgaatttgcactgttttgtaggccggataaggcgttTACGCCGCATCcggcatgaac > 1:1047295‑M2/81‑97 (MQ=255) gatgcgcgatgcttatcaggcctaccagaagattgcaatatattgaatttgcactgttttgtaggccggataaggcgttTACGCCGCATccggcatgaaca < 1:639745‑M2/22‑6 (MQ=255) gcttatcaggcctacaagggattcgcaatttgttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGtt > 1:724950‑M2/69‑101 (MQ=255) cttatcaggcctacaagggattcgcaatttgttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTa < 2:1030044‑M2/34‑1 (MQ=255) atcaggcctacaagggattcgcaatttgttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACa < 1:532523‑M2/37‑1 (MQ=255) tcaggcctacaagggattcgcaatttgttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAg < 1:1199007‑M2/38‑1 (MQ=255) aggcctacaagggattcgcaatttgttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGAt < 2:1110529‑M2/40‑1 (MQ=255) caagggattcgcaatttgttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTAt < 1:183250‑M2/47‑1 (MQ=255) cgcaatttgttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGcac > 1:1024023‑M2/46‑101 (MQ=255) cgcaatttgttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGcac > 2:355282‑M2/46‑101 (MQ=255) caatttgttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCacac > 1:284210‑M2/44‑101 (MQ=255) atttgttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCa > 2:585892‑M2/42‑101 (MQ=255) ttgttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAg < 2:14392‑M2/62‑1 (MQ=255) gttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTc < 1:922232‑M2/64‑1 (MQ=255) gttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTc < 1:1443944‑M2/64‑1 (MQ=255) ttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTcc > 1:1562533‑M2/37‑101 (MQ=255) ttgaatttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTcc > 1:840258‑M2/37‑101 (MQ=255) tttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAg < 1:877103‑M2/70‑1 (MQ=255) tttgcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAg < 2:955596‑M2/70‑1 (MQ=255) gcagaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCATGCGCACACCAAGTCCCGTAgcgc > 2:1457842‑M2/29‑101 (MQ=255) gaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCg > 1:1338612‑M2/26‑101 (MQ=255) gaatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCg > 1:1026832‑M2/26‑101 (MQ=255) aatttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGc > 2:328037‑M2/25‑101 (MQ=255) atttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCa > 2:163107‑M2/24‑101 (MQ=255) tttgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAg > 1:1453053‑M2/23‑101 (MQ=255) tgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGAc > 1:770883‑M2/21‑101 (MQ=255) tgtaggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGAc > 2:1147622‑M2/21‑101 (MQ=255) tgtacggcGGAGAGGGCGGTTGGGCCGGATACGGCATCTTAGTTTACGCCGTATAAAGATTAACTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGAc > 2:532343/8‑101 (MQ=255) aggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCAc > 1:1513170‑M2/18‑101 (MQ=255) ggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCTCCCGCAGACCACt < 2:507626‑M2/85‑1 (MQ=255) ggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACt < 2:665243‑M2/85‑1 (MQ=255) ggccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACt < 2:724945‑M2/85‑1 (MQ=255) ccggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGt > 1:671649‑M2/15‑101 (MQ=255) cggataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGtt > 2:1171152‑M2/14‑101 (MQ=255) ataaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCaa > 2:1273083‑M2/11‑101 (MQ=255) taaggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAAc < 1:70809‑M2/92‑1 (MQ=255) aggcgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCg < 2:1285794‑M2/94‑1 (MQ=255) aggcgttTACGCCGCATCCGGCATATTAGTGTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCg < 2:1149678‑M2/94‑1 (MQ=255) cgttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCGgcg > 1:1003839‑M2/5‑101 (MQ=255) gttTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCGgcgc > 1:588301‑M2/4‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCACTGTTCAACCGGCGC > 54/1‑112 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |