New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 10 | 1 = | 0 (0.000) | 29 (0.470) +TAAACAA |
23/186 | 1.6 | 100% | intergenic (–/–) | –/– | –/– |
? | 99 | = 16584 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
CCGCCAGTTGTTACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 99/16484‑16584 | ccGCCAGTTGTTACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGcgcg > 2:497236/1‑101 (MQ=255) gCCAGTTGTTACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGtt > 2:1587314‑M2/1‑99 (MQ=255) aGTTGTTACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtt > 2:1515508‑M2/1‑96 (MQ=255) aGTTGTTACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtt > 1:135339‑M2/1‑96 (MQ=255) aGTTGTTACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtt < 2:812442‑M2/101‑6 (MQ=255) gttgttACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgttt > 2:424668‑M2/1‑95 (MQ=255) ttgttACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgttta > 1:1709287‑M2/1‑94 (MQ=255) tgttACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttat < 2:94542‑M2/101‑9 (MQ=255) tgttACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttat < 2:1031507‑M2/101‑9 (MQ=255) cATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccgg > 1:104016‑M2/1‑88 (MQ=255) aTAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccgga < 1:1111236‑M2/101‑15 (MQ=255) tAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggat > 1:637205‑M2/1‑86 (MQ=255) tAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggat > 1:284750‑M2/1‑86 (MQ=255) cgcgCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcg > 2:1237401‑M2/1‑83 (MQ=255) ggCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgcct > 2:88587‑M2/1‑71 (MQ=255) gCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgcctt > 2:1124295‑M2/1‑70 (MQ=255) gTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttat < 1:563621‑M2/101‑34 (MQ=255) ttACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatc < 2:301725‑M2/101‑35 (MQ=255) aCAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGAGCGttgtttatgccggatgcggcgtgaacgccctatacg < 1:112490‑M2/101‑37 (MQ=255) cAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccgg > 2:864856‑M2/1‑64 (MQ=255) aGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggc < 1:869592‑M2/101‑39 (MQ=255) gCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcct > 1:779074‑M2/1‑61 (MQ=255) cTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggccta < 1:1707173‑M2/101‑42 (MQ=255) cTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggccta > 2:1417930‑M2/1‑60 (MQ=255) tttAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctac > 1:268350‑M2/1‑59 (MQ=255) ttAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGGGCGCGttgtttatgccggatgcggcgtgaaaaccttatccggcctaca < 2:1430894‑M2/101‑44 (MQ=255) tAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaa > 2:1062231‑M2/1‑57 (MQ=255) aaGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatat > 1:1031512‑M2/1‑39 (MQ=255) aaGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatat < 1:314789‑M2/101‑63 (MQ=255) aaaTTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatatattgc < 1:976644‑M2/101‑68 (MQ=255) aTTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatatattgcgg < 2:74709‑M2/101‑70 (MQ=255) aTTCCGGCTTCCTATTGAAGACAAAGTGCGCGttgtttaagccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatatattgcgg < 2:1043354‑M2/101‑70 (MQ=255) ccGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatatattgcggaga < 2:1434575‑M2/101‑73 (MQ=255) cGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatatattgcggagaa > 2:1277461‑M2/1‑28 (MQ=255) cGGCTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatatattgcggagaa < 2:1686913‑M2/101‑74 (MQ=255) cTTCCTATTGAAGACAAAGTGCGCGttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcgcaaattcaatatattgcggagaaaat < 1:715478‑M2/101‑77 (MQ=255) | CCGCCAGTTGTTACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAACGGAAATCCGAAGGAAAATTCCGGCTTCCTATTGAAGACAAAGTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 99/16484‑16584 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |