New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 10 1 =0 (0.000)64 (1.030)
+TAAACAA
42/186 0.3 100% intergenic (–/–) –/– –/–
?63 = 24466 0 (0.000)intergenic (–/–) –/– –/–

TTCCCGCCCTTATCGGACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  63/24366‑24466
                                                                                                    |                                                                                                  
ttCCCGCCCTTATCGGACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCt                                                                                                    <  1:1174109/101‑1 (MQ=255)
ttCCCGCCCTTATCGGACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCt                                                                                                    >  2:1540576/1‑101 (MQ=255)
  cccGCCCTTATCGGACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTtt                                                                                                  >  2:961101‑M2/1‑99 (MQ=255)
    cGCCCTTATCGGACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgt                                                                                                <  2:1310893‑M2/101‑5 (MQ=255)
       ccTTATCGGACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgttta                                                                                             >  2:901267‑M2/1‑94 (MQ=255)
        cTTATCGGACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttat                                                                                            <  2:1327562‑M2/101‑9 (MQ=255)
         ttATCGGACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatg                                                                                           >  2:961072‑M2/1‑92 (MQ=255)
           aTCGGACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgcc                                                                                         >  2:1253540‑M2/1‑90 (MQ=255)
             cGGACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccgg                                                                                       <  2:417729‑M2/101‑14 (MQ=255)
              ggACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccgga                                                                                      <  1:1151769‑M2/101‑15 (MQ=255)
                   gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcgg                                                                                 >  1:1391151‑M2/1‑82 (MQ=255)
                    ggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggc                                                                                >  2:142004‑M2/1‑81 (MQ=255)
                      aaTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgt                                                                              <  1:275177‑M2/101‑23 (MQ=255)
                      aaTGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgt                                                                              <  2:149150‑M2/101‑23 (MQ=255)
                        tGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgtta                                                                            <  1:1519902‑M2/101‑25 (MQ=255)
                         gAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaa                                                                           >  1:1588096‑M2/1‑76 (MQ=255)
                          aaGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaac                                                                          >  1:1038301‑M2/1‑75 (MQ=255)
                          aaGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaac                                                                          <  1:556629‑M2/101‑27 (MQ=255)
                           aGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacg                                                                         <  2:554119‑M2/101‑28 (MQ=255)
                            gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgc                                                                        >  1:242605‑M2/1‑73 (MQ=255)
                            gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgc                                                                        <  1:1517424‑M2/101‑29 (MQ=255)
                            gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgc                                                                        <  1:694062‑M2/101‑29 (MQ=255)
                            gTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGAGCGCTttgtttatgccggatgcggcgttaacgc                                                                        <  2:1592236‑M2/101‑29 (MQ=255)
                              aTTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgcct                                                                      >  1:508319‑M2/1‑71 (MQ=255)
                              aTTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgcct                                                                      <  2:301902‑M2/101‑31 (MQ=255)
                                 gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttat                                                                   >  2:341261‑M2/1‑68 (MQ=255)
                                 gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttat                                                                   >  2:918388‑M2/1‑68 (MQ=255)
                                 gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttat                                                                   >  1:1624927‑M2/1‑68 (MQ=255)
                                   tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatcc                                                                 >  1:748297‑M2/1‑66 (MQ=255)
                                   tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatcc                                                                 <  2:483619‑M2/101‑36 (MQ=255)
                                   tgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatcc                                                                 >  2:421842‑M2/1‑66 (MQ=255)
                                    gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccg                                                                >  2:521449‑M2/1‑65 (MQ=255)
                                       ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcc                                                             <  1:1051212‑M2/101‑40 (MQ=255)
                                          tGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctac                                                          >  2:1401749‑M2/1‑59 (MQ=255)
                                              gcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaa                                                      >  1:328771‑M2/1‑55 (MQ=255)
                                              gcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaa                                                      <  2:1517734‑M2/101‑47 (MQ=255)
                                                   aCGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtg                                                 >  2:1151764‑M2/1‑50 (MQ=255)
                                                     gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgca                                               >  1:1158825‑M2/1‑48 (MQ=255)
                                                       agagGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaa                                             <  2:181251‑M2/101‑56 (MQ=255)
                                                              caGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaata                                      >  2:1422212‑M2/1‑39 (MQ=255)
                                                               aGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatac                                     <  1:245899‑M2/101‑64 (MQ=255)
                                                               aGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatac                                     >  1:1592242‑M2/1‑38 (MQ=255)
                                                                gcgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaataca                                    >  1:899130‑M2/1‑37 (MQ=255)
                                                                  gcCACCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacatt                                  >  1:217438‑M2/1‑35 (MQ=255)
                                                                     aCCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgca                               >  2:566639‑M2/1‑32 (MQ=255)
                                                                     aCCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgca                               <  2:1588861‑M2/101‑70 (MQ=255)
                                                                     aCCGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgaggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgca                               <  1:1539910‑M2/101‑70 (MQ=255)
                                                                      ccGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgcag                              >  1:189326‑M2/1‑31 (MQ=255)
                                                                       cGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgcaga                             <  2:1541132‑M2/101‑72 (MQ=255)
                                                                       cGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgcaga                             >  2:1707318‑M2/1‑30 (MQ=255)
                                                                       cGGGTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgcaga                             >  1:76247‑M2/1‑30 (MQ=255)
                                                                          gTATACAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgcagaatt                          <  1:520872‑M2/101‑75 (MQ=255)
                                                                           tataCAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgcagaattt                         <  2:954527‑M2/101‑76 (MQ=255)
                                                                           tataCAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgcagaattt                         <  1:1244440‑M2/101‑76 (MQ=255)
                                                                            ataCAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgcagaatttt                        <  1:646748‑M2/101‑77 (MQ=255)
                                                                             ttcagATTATTGACAAAGTGCGCTttgtttatgccggatgctgcgtgaacgccttatcccgcctacaaaatcgttcaaattcaatttattgcaatcatctt                       <  2:1661391‑M2/99‑78 (MQ=255)
                                                                              aCAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcgacgttaacgccttatccggcctacaaagtcgtgcaaattcaatacattgcagaattttcg                      >  2:178542‑M2/1‑23 (MQ=255)
                                                                               cAGATTGTTGACAAAGTGCGCTttgtttatgccggatgcggcgttaacgccttatccggcctacaaaatcgtgcaaattcaatacattgcagaattttcgt                     <  2:1401375‑M2/101‑80 (MQ=255)
                                                                               cAGATTATTGACAAAGTGCGCTttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaatcgttcaaattcaatatattgcaatcatcttgt                     <  2:37674‑M2/101‑80 (MQ=255)
                                                                                   ttattgACAAAGTGCGCTttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaatcgtgcaaattcaatatattgcaatcatcttgtaggc                 <  1:270798‑M2/101‑84 (MQ=255)
                                                                                   ttattgACAAAGTGCGCTttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaatcgtgcaaattcaatatattgcaatcatcttgtaggc                 <  1:241061‑M2/101‑84 (MQ=255)
                                                                                    tattgacAAAGTGCGCTttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaatcgtgcaaattcaatatattgcaatcatcttgtagacc                >  1:279692‑M2/3‑17 (MQ=255)
                                                                                        gACAAAGTGCGCTttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaatcgtgcaaattcaatatattgcaatcatcttgtaggcctgat            >  1:927416‑M2/1‑13 (MQ=255)
                                                                                          cAAAGTGCGCTttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaatcgtgcaaattcaatatattgcaatcatcttgtaggcctgataa          >  1:1614764‑M2/1‑11 (MQ=255)
                                                                                          cAAAGTGCGCTttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaatcgtgcaaattcaatatattgcaatcatcttgtaggcctgataa          >  1:526969‑M2/1‑11 (MQ=255)
                                                                                           aaaGTGCGCTttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaatcgtgcaaattcaatatattgcaatcatcttgtaggcctgataag         <  1:973276‑M2/101‑92 (MQ=255)
                                                                                           aaaGTGCGCTttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaatcgtgcaaattcaatatattgcaatcatcttgtaggcctgataag         >  1:678712‑M2/1‑10 (MQ=255)
                                                                                              gTGCGCTttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaatcgtgcaaattcaatatattgcaatcatcttgtaggcctgataagtgt      >  1:1027222‑M2/1‑7 (MQ=255)
                                                                                                  gcTttgtttatgccggatgcggcgtgaacgccttatccggcctacaaaatcgtgcaaattcaatatattgcaatcatcttgtaggcctgataagcgtagcg  <  1:1004254‑M2/101‑99 (MQ=255)
                                                                                                    |                                                                                                  
TTCCCGCCCTTATCGGACAGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  63/24366‑24466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.