| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 103802 | 108 (1.620) | 34 (0.670) +TTTGACAGCCGTTGTAGGCCTGAT |
22/152 | 1.7 | 45.3% | intergenic (–/–) | –/– | –/– |
| ? | 204 | = 4218 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 204/4119‑4218 | tGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTa > 1:1152225‑M2/1‑100 (MQ=255) cAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcag > 1:568016‑M2/1‑96 (MQ=255) aGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcagg < 2:697100‑M2/101‑7 (MQ=255) aGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcagg > 1:427185‑M2/1‑95 (MQ=255) aGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcagg > 1:1305641‑M2/1‑95 (MQ=255) aTGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcc > 2:1305098‑M2/1‑93 (MQ=255) aTGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcc < 2:77501‑M2/101‑9 (MQ=255) aTGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcc > 2:266804‑M2/1‑93 (MQ=255) ggAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggccta < 2:441071‑M2/101‑11 (MQ=255) aaaTCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctaca < 2:1075140‑M2/101‑13 (MQ=255) aaTCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaa > 2:169376‑M2/1‑88 (MQ=255) ggtAGTAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtc < 1:514349‑M2/101‑22 (MQ=255) ggtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtc > 1:1017637‑M2/1‑80 (MQ=255) gtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtca > 2:1155945‑M2/1‑79 (MQ=255) gtAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtca < 2:1210022‑M2/101‑23 (MQ=255) tAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaa < 1:759051‑M2/101‑24 (MQ=255) tAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatg > 1:82595‑M2/1‑75 (MQ=255) tAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatg > 1:339825‑M2/1‑75 (MQ=255) gCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgta < 1:322196‑M2/101‑29 (MQ=255) cAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtag > 2:358167‑M2/1‑72 (MQ=255) aaaaCCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtagg < 2:905706‑M2/101‑31 (MQ=255) aaaCCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggc < 2:969153‑M2/101‑32 (MQ=255) ccTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccgg > 1:1628434‑M2/1‑67 (MQ=255) ccTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccgg > 1:958801‑M2/1‑67 (MQ=255) tGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggat > 2:1560112‑M2/1‑65 (MQ=255) gggCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggata > 1:672544‑M2/1‑64 (MQ=255) gggCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggata > 2:22351‑M2/1‑64 (MQ=255) gggCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggata > 2:92173‑M2/1‑64 (MQ=255) cGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggc > 2:36115‑M2/1‑60 (MQ=255) aTAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtt < 1:685984‑M2/101‑45 (MQ=255) aTAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtt > 1:162368‑M2/1‑57 (MQ=255) aTAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtt < 2:1079908‑M2/101‑45 (MQ=255) tAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgttt > 1:1097342‑M2/1‑56 (MQ=255) tAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgttt > 1:329580‑M2/1‑56 (MQ=255) aGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttac > 1:111604‑M2/1‑54 (MQ=255) aGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttac > 2:753210‑M2/1‑54 (MQ=255) aGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttac > 1:706794‑M2/1‑54 (MQ=255) ggCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacg < 2:1046239‑M2/101‑49 (MQ=255) cGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgcc > 1:135580‑M2/1‑51 (MQ=255) gTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgccg < 2:979670‑M2/101‑52 (MQ=255) tACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgccgcat < 1:797221‑M2/101‑55 (MQ=255) cgccgcATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgccgcatcc < 2:288751‑M2/101‑57 (MQ=255) aTTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgccgcatccggcata < 1:666826‑M2/101‑63 (MQ=255) aTTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgccgcatccggcata < 1:370532‑M2/101‑63 (MQ=255) tCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgccgcatccggcataaa > 1:206948‑M2/1‑37 (MQ=255) cGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgccgcatccggcataaaa > 1:1609282‑M2/1‑36 (MQ=255) cGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgccgcatccggcataaaa > 2:950947‑M2/1‑36 (MQ=255) ggCAACCAACGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgccgcatccggcataaaaa < 2:516410‑M2/101‑67 (MQ=255) aaccaacGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgccgcatccggcataaaaacag < 2:1706186‑M2/101‑70 (MQ=255) accaacGCCTGATGCGACGCTTGCGCGTCTTatcaggcctacaacggctgtcaaatgtaggccggataaggcgtttacgccgcatccggcataaaaacagg > 2:1006365‑M2/1‑31 (MQ=255) | TGCCCAGATGGAAATCTGGTGGTAATAGCAAAACCTGGGCCGGATAAGGCGTTTACGCCGCATTCGGCAACCAACGCCTGATGCGACGCTTGCGCGTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 204/4119‑4218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |