| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 1 = | 0 (0.000) | 26 (0.480) +CCTACGGTTCGATGCGATT |
19/162 | 0.5 | 52.1% | intergenic (–/–) | –/– | –/– |
| ? | 51 | 15466 = | 59 (0.890) | intergenic (–/–) | –/– | –/– | |||||
AACGAATAAATAGCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAC > 51/15366‑15566 | gtgggtagtaaagtggttgcagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaaggctttttcgggccaccggttcaatgggattt > 2:1094214‑M2/101‑101 (MQ=255)gtgggtagtaaagtggttgcagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattt < 1:1552098‑M2/1‑1 (MQ=255)gtgggtagtaaagcggttgcagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggctcgatgcgattt > 1:81499‑M2/101‑101 (MQ=255) aCGAATAAATAGCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGgtg < 2:282633/101‑1 (MQ=255) gtagtaaagtggttgcagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAg > 1:16399‑M2/97‑101 (MQ=255) gtagtaaagtggttgcagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAg < 1:635390‑M2/5‑1 (MQ=255) aataaataGCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAg < 2:380067/101‑1 (MQ=255) aataaataGCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAg < 2:1378154/101‑1 (MQ=255) aataaataGCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAg < 2:1247304/101‑1 (MQ=255) tagtaaagtggttgcagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAgg > 1:92568‑M2/96‑101 (MQ=255) taaataGCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGt < 1:967817/101‑1 (MQ=255) taaataGCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGt > 2:870005/1‑101 (MQ=255) ataGCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCgg < 1:1386795/101‑1 (MQ=255) aaagtggttgcagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCgg < 1:1128507‑M2/10‑1 (MQ=255) taGCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGa > 1:1663254/1‑101 (MQ=255) aGCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGAt > 1:1661138/1‑101 (MQ=255) gtggttgcagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATa < 1:1009397‑M2/13‑1 (MQ=255) gCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATa < 1:1103223/101‑1 (MQ=255) tggttgcagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATaa > 1:698540‑M2/88‑101 (MQ=255) gttgcagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGa < 2:1138316‑M2/16‑1 (MQ=255) gttgcagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGa < 1:221213‑M2/16‑1 (MQ=255) ggAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGa < 2:1469282/101‑1 (MQ=255) ggAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGa > 2:1564800/1‑101 (MQ=255) gAATTTACGGCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGan < 1:422917/101‑2 (MQ=255) gAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGAt > 1:1153066/1‑101 (MQ=255) cagaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATgcg > 2:331496‑M2/82‑101 (MQ=255) gaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATGAGATGCGCa < 1:211197‑M2/22‑1 (MQ=255) gaggcgaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCa < 2:1486000‑M2/22‑1 (MQ=255) gaagaagtaagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAgcat < 2:71384‑M2/27‑1 (MQ=255) cATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAgcat > 2:1716306/1‑101 (MQ=255) cATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAgcat < 2:202768/101‑1 (MQ=255) cATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAgcat < 1:1652157/101‑1 (MQ=255) aTTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAgcatc > 2:1255533/1‑101 (MQ=255) aTTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAgcatc < 2:391294/101‑1 (MQ=255) aTTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAgcatc > 1:681755/1‑101 (MQ=255) aTTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAgcatc > 2:939802/1‑101 (MQ=255) aTTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAgcatc > 1:464461/1‑101 (MQ=255) tAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAgcatcac < 2:213216/101‑3 (MQ=255) aaaTTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAgcatcgca > 1:224322/1‑101 (MQ=255) aaaTTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGACAAGCTGCGAAAgcatcgca > 2:953731/1‑101 (MQ=255) ttCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATcc > 1:1465980/1‑101 (MQ=255) ttCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATcc < 2:1448551/101‑1 (MQ=255) taagagcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATcc > 2:397004‑M2/68‑101 (MQ=255) gcaattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGAcaa > 1:341828‑M2/63‑100 (MQ=255) acgCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACatt > 1:935085/1‑101 (MQ=255) acgCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACatt > 2:285396/1‑101 (MQ=255) cgCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACatta < 1:163161/101‑1 (MQ=255) aattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACaata > 2:1499820‑M2/61‑101 (MQ=255) aattaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACaata < 1:138119‑M2/41‑1 (MQ=255) attaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGAcaataa > 2:392253‑M2/60‑100 (MQ=255) attaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGAcaataa > 1:647971‑M2/60‑100 (MQ=255) ttaactatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGacaataag > 1:659894‑M2/59‑99 (MQ=255) cTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACattatt > 1:929627/1‑101 (MQ=255) tttAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTg > 2:325444/1‑101 (MQ=255) taactatttgccggatgctgcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAagaatcgcatccaccaaaactg > 2:1669106‑M2/58‑91 (MQ=255) tAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCg > 1:1578783/1‑101 (MQ=255) actatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATccgacaataagtgc < 1:1705970‑M2/46‑6 (MQ=255) actatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCATccgacaataagtgc > 2:935227‑M2/56‑96 (MQ=255) aaaTAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCgg < 2:826761/101‑1 (MQ=255) tatttgccggatgcggcgtaaacgccttatccggcctacggttcgatgcgattTGTAGGTCGGATAAGATGCGCAAGCATCGCatccgacaataagtgccg > 2:436231‑M2/54‑94 (MQ=255) aaTAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGc > 1:762189/1‑101 (MQ=255) aCTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGttt < 2:837513/101‑1 (MQ=255) cTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAAGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTg > 2:59429/1‑101 (MQ=255) aaTGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGt < 1:1255538/101‑1 (MQ=255) aaTGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGt < 2:1511/101‑1 (MQ=255) aTGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTg > 1:1665185/1‑101 (MQ=255) tGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGc > 2:1049502/1‑101 (MQ=255) gTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGcc > 2:1414806/1‑101 (MQ=255) gTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGcc > 1:480356/1‑101 (MQ=255) aaaaaTCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGAt < 1:619491/101‑1 (MQ=255) aaaaaTCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGAt < 2:571640/101‑1 (MQ=255) aaaaaTCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGAt < 1:620464/101‑1 (MQ=255) aTCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATgcgg < 1:1716312/101‑1 (MQ=255) tCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATgcggc < 2:1284785/101‑1 (MQ=255) cGCCATACATAACACAAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTNNNNNNANGGCGCCGGATgcggcg > 2:957792/1‑101 (MQ=38) catacataACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGa > 1:1069835/1‑101 (MQ=255) tacataACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAgc > 2:142328/1‑101 (MQ=255) ataACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGcc > 2:1591858/1‑101 (MQ=255) ataACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGcc > 2:1535861/1‑101 (MQ=255) acacCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTa < 2:464456/101‑1 (MQ=255) cacCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTAt < 2:681750/101‑1 (MQ=255) tgcgatttgtaggtcggATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggttttt > 1:318774‑M2/8‑45 (MQ=255) gcgatttgtaggtcgGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggttttta > 2:1275265‑M2/7‑44 (MQ=255) cAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCg < 1:1564806/101‑1 (MQ=255) cAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCg > 2:358565/1‑101 (MQ=255) cAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCg > 2:930522/1‑101 (MQ=255) cAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCg < 2:706802/101‑1 (MQ=255) cgatttgtaggtcGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttat < 2:54928‑M2/96‑59 (MQ=255) atttgtaggTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattg < 2:903731‑M2/98‑61 (MQ=255) ttgtaGGTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaa > 1:1499826‑M2/2‑39 (MQ=255) tgtAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaag < 2:350295‑M2/101‑64 (MQ=255) tgtAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaag > 2:279171‑M2/1‑38 (MQ=255) tgtAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTAc > 2:1539247/1‑101 (MQ=255) | AACGAATAAATAGCAGGAATTTACGCCATTAAATTCACGACGCTTTAAATAAGCGTAACTTATGGAAATGTTAAAAAATCGCCATACATAACACCAAAGGTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACATTATTGCGGCACAGGAGTTTGGCAACGGTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAC > 51/15366‑15566 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |