| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 85 | 1 = | 0 (0.000) | 45 (0.720) +TGTTCA |
38/188 | 0.6 | 59.9% | intergenic (–/–) | –/– | –/– |
| ? | 91 | = 8425 | 64 (0.960) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTCGCCGCACGCTTCGCTTTGGTCGCTGCAG > 85/1‑100 | atgatctctgcaatatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAAc > 2:632091‑M1/77‑101 (MQ=255) tgatctctgcaatatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAAcc > 1:1515774‑M1/76‑101 (MQ=255) gatctctgcaatatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAAccc > 2:1661215‑M1/75‑101 (MQ=255) atctctgcaatatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCct > 2:984665‑M1/74‑101 (MQ=255) ctctgcaatatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCctct > 2:641954‑M1/72‑101 (MQ=255) ctgcaatatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCtcttc < 1:717314‑M1/32‑1 (MQ=255) tgcaatatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCtcttct > 1:164927‑M1/69‑101 (MQ=255) tgcaatatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCtcttct > 1:638797‑M1/69‑101 (MQ=255) gcaatatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTcttctt > 1:1546572‑M1/68‑101 (MQ=255) gcaatatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTcttctt < 1:580972‑M1/34‑1 (MQ=255) aatatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCtttt < 2:885974‑M1/36‑1 (MQ=255) atatattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTa > 1:393462‑M1/65‑101 (MQ=255) tattgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAag > 2:397713‑M1/62‑101 (MQ=255) attgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAaga < 1:551693‑M1/41‑1 (MQ=255) ttgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAagag > 1:1206624‑M1/60‑101 (MQ=255) ttgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAagag < 2:1364971‑M1/42‑1 (MQ=255) tgaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAgg < 2:1717404‑M1/43‑1 (MQ=255) gaatttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAggg > 1:1666482‑M1/58‑101 (MQ=255) atttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTa > 1:1015122‑M1/56‑101 (MQ=255) atttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGAATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTa > 2:1347949‑M1/56‑101 (MQ=255) tttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTAt > 1:516850‑M1/55‑101 (MQ=255) tttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTAt > 2:36229‑M1/55‑101 (MQ=255) ttgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTAtt > 2:699262‑M1/54‑101 (MQ=255) tgcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTg > 2:577038‑M1/53‑101 (MQ=255) gcgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGa > 2:1027410‑M1/52‑101 (MQ=255) cgtgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGAt < 2:452865‑M1/51‑1 (MQ=255) tgattatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCa > 2:281386‑M1/49‑101 (MQ=255) tatgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCActct > 1:375420‑M1/45‑101 (MQ=255) tgtaggccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGc < 1:563949‑M1/59‑1 (MQ=255) gccggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACtt > 2:339275‑M1/38‑101 (MQ=255) cggataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACtttt > 1:1357185‑M1/36‑101 (MQ=255) gataaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACtttttt > 1:1514124‑M1/34‑101 (MQ=255) ccgatctgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTttc > 1:1706904‑M1/33‑101 (MQ=255) aaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTttctt < 1:133119‑M1/71‑1 (MQ=255) aaggcgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTttctt < 1:821900‑M1/71‑1 (MQ=255) cgttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTcgcc > 1:1150599‑M1/27‑101 (MQ=255) gttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCcacttttttcagatcgg < 2:1706898‑M1/76‑8 (MQ=255) gttcacgccgcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTcgccg < 2:460199‑M1/76‑1 (MQ=255) gcatccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTCGCCGCAcgcttcg > 2:856056‑M1/17‑101 (MQ=255) catccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTCGCCGCAcgcttcgc > 2:1451183‑M1/16‑101 (MQ=255) atccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTCGCCGCAcgcttcgct < 1:817867‑M1/87‑1 (MQ=255) atccggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTCGCCGCAcgcttcgct < 1:255959‑M1/87‑1 (MQ=255) cggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTCGCCGCACGCTTCGCTTTg > 1:1677821‑M1/12‑101 (MQ=255) ggcatgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTATTTCTTCGCCGCACGCTTCGCTTTgg < 1:123907‑M1/91‑1 (MQ=255) catgaacaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTCGCCGCACGCTTCGCTTTGGTc < 1:802116‑M1/93‑1 (MQ=255) acaAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTCGCCGCACGCTTCGCTTTGGTCGCTGc < 1:667793‑M1/98‑1 (MQ=255) aAAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTCGCCGCACGCTTCGCTTTGGTCGCTGCAg < 2:121524‑M1/100‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCGCATTTTGTCAGCAATCTAACCCTCTTCTTTTAAAGAGGGTATTGATCACTCTGCCACTTTTTTCTTCGCCGCACGCTTCGCTTTGGTCGCTGCAG > 85/1‑100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |