| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 57 | 1 = | 0 (0.000) | 23 (0.390) +GGAGCACGAAT |
19/178 | 2.3 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 73 | = 22246 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGT > 57/1‑101 | catgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACt > 1:1292228‑M1/53‑101 (MQ=255) atgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACtt < 2:912833‑M1/50‑1 (MQ=255) atgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACtt < 2:350565‑M1/50‑1 (MQ=255) tgactgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTa < 1:463826‑M1/51‑1 (MQ=255) actgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGc > 2:630403‑M1/49‑101 (MQ=255) ctgccggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCg > 2:377375‑M1/48‑101 (MQ=255) cggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCTGTAt > 2:548517‑M1/44‑101 (MQ=255) ggatgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTAtt < 1:272695‑M1/59‑1 (MQ=255) tgcggcgtaagcgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCt > 1:1706172‑M1/40‑101 (MQ=255) tgcggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCt < 2:672936‑M1/62‑1 (MQ=255) ggcgtaaacgccttatccggcctacattcgttctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCa < 2:444388‑M1/65‑1 (MQ=255) ggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCa > 1:54462‑M1/37‑101 (MQ=255) ggcgtaaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCa < 2:835178‑M1/65‑1 (MQ=255) taaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCAc < 2:1553968‑M1/69‑1 (MQ=255) aaacgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCAcc < 2:200703‑M1/70‑1 (MQ=255) acgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGc < 1:708338‑M1/72‑1 (MQ=255) cgccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCa > 2:1660470‑M1/29‑101 (MQ=255) gccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCAc > 1:1616453‑M1/28‑101 (MQ=255) ccttatccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACg < 2:1411579‑M1/75‑1 (MQ=255) ccggcctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAg < 2:709119‑M1/81‑1 (MQ=255) ctacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCa < 2:300635‑M1/86‑1 (MQ=255) tacattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGAGTCAg < 1:1018370‑M1/87‑1 (MQ=255) acattcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAgg < 2:1437320‑M1/88‑1 (MQ=255) attcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGAt < 2:952580‑M1/90‑1 (MQ=255) tcgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCt > 1:912838‑M1/10‑101 (MQ=255) cgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTg > 1:18334‑M1/9‑101 (MQ=255) cgtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTg < 2:781160‑M1/93‑1 (MQ=255) gtgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGc < 2:1696220‑M1/94‑1 (MQ=255) tgctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCa < 1:1090590‑M1/95‑1 (MQ=255) gctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCTAGTGTCAGGATCTGCAt < 2:149455‑M1/96‑1 (MQ=255) ctccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCAtt > 1:952585‑M1/5‑101 (MQ=255) ccCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTc > 2:899513‑M1/3‑101 (MQ=255) cCGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCg > 2:1090585‑M1/2‑101 (MQ=255) cGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGt > 1:137923/1‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGT > 57/1‑101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |