New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 47 1 =0 (0.000)64 (1.140) 47/168 0.1 61.8% intergenic (–/–) –/– –/–
?91 8342 = 79 (1.410)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGAATATTTACGGT  >  47/1‑101
                                                                                                    |                                                                                                    
gattactggcacagagtgccggatgcggagtgaacgccttatccggcctacaaaagcacgcaaattcaatatattgcagagattgcgtaggcctgataagc                                                                                                      >  1:385032‑M1/101‑101 (MQ=255)
                    ggatgcggcgtgaacgccttatcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCAttttt                                                                                  <  2:327409‑M1/21‑1 (MQ=255)
                    ggatgcggcgtgaacgccttatcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCAttttt                                                                                  <  2:1355008‑M1/21‑1 (MQ=255)
                       tgcggcgtgaacgccttatcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCg                                                                               >  1:292123‑M1/78‑101 (MQ=255)
                         cggcgtgaacgccttatcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGt                                                                             <  2:568506‑M1/26‑1 (MQ=255)
                          cggcgtgaacgccttatcctgcctacaaaagcacgcaaattcaatatattgcgagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGtt                                                                            <  2:1384728‑M1/27‑1 (MQ=255)
                            cgtgaacgccttatcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGc                                                                          >  2:139249‑M1/73‑101 (MQ=255)
                             gtgaacgccttatcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGcc                                                                         <  1:1588784‑M1/30‑1 (MQ=255)
                             gtgaacgccttatcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGcc                                                                         <  1:1680330‑M1/30‑1 (MQ=255)
                                    ccttatcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGtt                                                                  <  1:1144565‑M1/37‑1 (MQ=255)
                                     cttatcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGttt                                                                 <  1:504042‑M1/38‑1 (MQ=255)
                                      ttatcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTc                                                                <  1:1139267‑M1/39‑1 (MQ=255)
                                        atcctgccttcaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCaa                                                              >  2:559428‑M1/61‑101 (MQ=255)
                                        atcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCaa                                                              <  1:95908‑M1/41‑1 (MQ=255)
                                        atcctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCaa                                                              <  1:455613‑M1/41‑1 (MQ=255)
                                          cctgcctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAAc                                                            <  1:167948‑M1/43‑1 (MQ=255)
                                              cctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGc                                                        <  2:1646793‑M1/47‑1 (MQ=255)
                                               ctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCa                                                       <  1:386553‑M1/48‑1 (MQ=255)
                                               ctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCa                                                       <  1:860761‑M1/48‑1 (MQ=255)
                                               ctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCa                                                       <  2:928546‑M1/48‑1 (MQ=255)
                                               ctacaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCa                                                       <  2:7946‑M1/48‑1 (MQ=255)
                                                  caaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCg                                                    >  1:1002041‑M1/51‑101 (MQ=255)
                                                   aaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGa                                                   <  2:679475‑M1/52‑1 (MQ=255)
                                                     aagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCTCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATa                                                 <  1:557541‑M1/54‑1 (MQ=255)
                                                     aagcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATa                                                 >  1:311807‑M1/48‑101 (MQ=255)
                                                      agcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATaa                                                >  1:777548‑M1/47‑101 (MQ=255)
                                                      agcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATaa                                                >  2:894360‑M1/47‑101 (MQ=255)
                                                      agcacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATaa                                                >  2:822517‑M1/47‑101 (MQ=255)
                                                        cacgcaaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGt                                              <  1:1317848‑M1/57‑1 (MQ=255)
                                                            caaattcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGttttt                                          >  2:79261‑M1/41‑101 (MQ=255)
                                                               attcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCt                                       <  2:1118728‑M1/64‑1 (MQ=255)
                                                               attcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCt                                       >  2:1561556‑M1/38‑101 (MQ=255)
                                                                 tcaatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCttt                                     <  2:972669‑M1/66‑1 (MQ=255)
                                                                  caatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCtttt                                    <  2:1127452‑M1/67‑1 (MQ=255)
                                                                  caatatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCtttt                                    <  2:1216991‑M1/67‑1 (MQ=255)
                                                                    atatattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTgg                                  >  2:1118675‑M1/33‑101 (MQ=255)
                                                                       tattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGc                               <  2:1293677‑M1/72‑1 (MQ=255)
                                                                       tattgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGc                               <  1:1521176‑M1/72‑1 (MQ=255)
                                                                        attgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGca                              <  2:125937‑M1/73‑1 (MQ=255)
                                                                         ttgcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGcac                             >  1:981110‑M1/28‑101 (MQ=255)
                                                                           gcagagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAg                           >  2:883971‑M1/26‑101 (MQ=255)
                                                                            cagagatggcgtaggcctgataagCGTAGCGCATCAGGCAGTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAgg                          >  2:228670‑M1/25‑101 (MQ=255)
                                                                             agagatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAggg                         <  1:3673‑M1/78‑1 (MQ=255)
                                                                             agagatggcgtaggcctgataagCGTAGCGCATCAGCCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAggg                         <  2:1493339‑M1/78‑1 (MQ=255)
                                                                               agatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTa                       <  1:504924‑M1/80‑1 (MQ=255)
                                                                               agatggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTa                       <  1:945063‑M1/80‑1 (MQ=255)
                                                                                  tggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTaaga                    >  2:1695443‑M1/19‑101 (MQ=255)
                                                                                   ggcgtaggcctgataagCGTAGCGCATCAGTCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTaagaa                   >  1:1341092‑M1/18‑101 (MQ=255)
                                                                                   ggcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTaagaa                   >  2:318577‑M1/18‑101 (MQ=255)
                                                                                    gcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTaagaag                  >  2:1628535‑M1/17‑101 (MQ=255)
                                                                                    gcgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTaagaag                  >  2:184345‑M1/17‑101 (MQ=255)
                                                                                    gcgtaggcctgataagCGTAGCGCATCAGGCATCTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTaagaag                  >  2:408121‑M1/17‑101 (MQ=255)
                                                                                     cgtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGc                 <  1:615348‑M1/86‑1 (MQ=255)
                                                                                      gtaggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCa                >  2:760524‑M1/15‑101 (MQ=255)
                                                                                       taggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCAt               >  1:194031‑M1/14‑101 (MQ=255)
                                                                                        aggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATg              >  1:995455‑M1/13‑101 (MQ=255)
                                                                                         ggcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGa             <  1:1041813‑M1/90‑1 (MQ=255)
                                                                                          gcctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGaa            <  2:297873‑M1/91‑1 (MQ=255)
                                                                                            ctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGAata          <  1:751405‑M1/93‑1 (MQ=255)
                                                                                            ctgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGAata          >  2:504037‑M1/9‑101 (MQ=255)
                                                                                             tgataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGAatat         <  2:1404769‑M1/94‑1 (MQ=255)
                                                                                               ataagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGAATAttt       >  1:924185‑M1/6‑101 (MQ=255)
                                                                                                 aagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGAATATTTAc     >  1:896020‑M1/4‑101 (MQ=255)
                                                                                                 aagCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGAATATTTAc     >  1:230494‑M1/4‑101 (MQ=255)
                                                                                                  agCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGAATATTTACg    >  2:945058‑M1/3‑101 (MQ=255)
                                                                                                    CGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGAATATTTACGGt  <  1:1054238‑M1/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCAAACCCGCATCGATAAGTTTTTGCTTTTGGTGCACAGGGTAAGAAGCATGAATATTTACGGT  >  47/1‑101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.